| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5257 |
|---|
| Symbol | |
|---|
| ID | 4644723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5632895 |
|---|
| End bp | 5633896 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639808732 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_956034 |
|---|
| Protein GI | 120406205 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.367408 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTCA GTCCAGACGA GGGGCAGCAG GCTGTCGCCG ATGTGGTGAC GTCGGTGCTC
GAGCGGGACA ACACCTGGGA TGCCCTGGTT TCCGGGGGTG TCACGGCGCT CGGCGTGCCC
GAGCGTCTCG GCGGTGACGG CGTCGGCTTT GCCGAGATGG CGACGGCCCT GACCGAGATC
GGCAGGCACG GCACCATCAG CCCGGCGCTG GTCACGCTCG GGACGACGGC GGTGCTGCTC
GACCTGGCCT CCGAGGCCCA GCAGGACCGG TACCTCGGCG GTGTCGCAAA GGGGTCGGTG
CTGACGCTGG CGCTGAACGA GCCGGGTGCG CAGTTGCCGG ACCGGCCCGC TGTGGCGCTC
GCCGCGGGAA AGCTCAACGG CACCAAGGTG GGTGTCGGAT ATGCGGCGCA GGCTGACTGG
ATCGTGGTGA CGACCGACAA CGGCGTCGTG GTGGTCCCCG GCAAGGCCGA CGGCCTGACG
GTCACCAAGA CGCCGACGTC GAACGGATCC GACGAGTACG TGCTGGCCTT CGCCGACGTC
GCTGTCGCCG ACGCCGACGT GCTGGAAGGG GCGACACCGC ATCGGGTCAA CCAGCTGGTG
CTCGCCGCCG TCGGCGCGTT CTCGGCCGGG CTGGTCGCCG GCGCGCTGCG CCTGACCGCC
GACTACGTGG CGACCAGGGA ACAGTTCGGC AGGCCGCTGT CGACGTTCCA GACGGTGGCC
GCCCAGCTCT CGGAGGTCTA CATCGCCTCG CGCACCATCT CGCTGCTCTC CACATCGGTG
GCGTGGCAGC TGACCGAGGG CCGCGATGCC GCGGACGATC TGGCGATCCT GGGTTACTGG
TTGGCATCGC AGGCCCCGCC GGCGATGCGA CTCTGCCATC ATCTGCACGG CGGCATGGGC
ATGGACATCA CCTACCCGAT GGACCGCTAC TACTCCTCGA TCAAGGACCT GACCCGGTTG
CTGGGGGGTC CGTCGCACCG TCTGGATCTG GTGGGAGCCT GA
|
|---|
| Protein sequence | MDFSPDEGQQ AVADVVTSVL ERDNTWDALV SGGVTALGVP ERLGGDGVGF AEMATALTEI
GRHGTISPAL VTLGTTAVLL DLASEAQQDR YLGGVAKGSV LTLALNEPGA QLPDRPAVAL
AAGKLNGTKV GVGYAAQADW IVVTTDNGVV VVPGKADGLT VTKTPTSNGS DEYVLAFADV
AVADADVLEG ATPHRVNQLV LAAVGAFSAG LVAGALRLTA DYVATREQFG RPLSTFQTVA
AQLSEVYIAS RTISLLSTSV AWQLTEGRDA ADDLAILGYW LASQAPPAMR LCHHLHGGMG
MDITYPMDRY YSSIKDLTRL LGGPSHRLDL VGA
|
|---|
| |