21 homologs were found in PanDaTox collection
for query gene Bphyt_5431 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010676  Bphyt_5431  transcriptional regulator, XRE family  100 
 
 		 110 aa  215  2e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  0.716387  normal  0.867638 
 
 
-
 
NC_011060  Ppha_2047  transcriptional regulator, XRE family  38.46 
 
 		 83 aa  58.2  0.00000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_009439  Pmen_4031  XRE family transcriptional regulator  35 
 
 		 88 aa  58.2  0.00000004  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.858841 
 
 
-
 
NC_007951  Bxe_A1931  XRE family transcriptional regulator  34.15 
 
 		 88 aa  57  0.00000008  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0820  transcriptional regulator, XRE family  40.54 
 
 		 79 aa  54.7  0.0000004  Geobacter sp. M21  Bacteria  n/a    normal  0.0102782 
 
 
-
 
NC_010815  Glov_3687  transcriptional regulator, XRE family  39.19 
 
 		 79 aa  53.9  0.0000007  Geobacter lovleyi SZ  Bacteria  normal  1  normal  1 
 
 
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NC_007514  Cag_1274  XRE family transcriptional regulator  37.18 
 
 		 86 aa  52  0.000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.329441  n/a   
 
 
-
 
NC_008607  Ppro_3808  XRE family transcriptional regulator  38.46 
 
 		 80 aa  50.8  0.000006  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0020912  n/a   
 
 
-
 
NC_008786  Veis_3102  XRE family transcriptional regulator  36.25 
 
 		 87 aa  50.4  0.000008  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0346423 
 
 
-
 
NC_012793  GWCH70_3135  transcriptional regulator, XRE family  35.9 
 
 		 137 aa  48.5  0.00003  Geobacillus sp. WCH70  Bacteria  normal  0.317529  n/a   
 
 
-
 
NC_008543  Bcen2424_5619  XRE family transcriptional regulator  34.85 
 
 		 159 aa  48.1  0.00004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.173792  normal  0.0387834 
 
 
-
 
NC_008061  Bcen_5240  XRE family transcriptional regulator  34.85 
 
 		 159 aa  48.1  0.00004  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_0204  XRE family transcriptional regulator  36.62 
 
 		 82 aa  43.9  0.0007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_1922  transcriptional regulator, XRE family  44.44 
 
 		 128 aa  43.1  0.001  Dickeya zeae Ech1591  Bacteria  normal  0.243972  n/a   
 
 
-
 
NC_013159  Svir_36660  predicted transcriptional regulator with C-terminal CBS domains  43.86 
 
 		 293 aa  42.4  0.002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0372485  normal  0.380414 
 
 
-
 
NC_012560  Avin_43580  DNA binding protein, XRE-like protein  38.33 
 
 		 85 aa  42  0.003  Azotobacter vinelandii DJ  Bacteria  normal  0.485824  n/a   
 
 
-
 
NC_013411  GYMC61_3288  transcriptional regulator, XRE family  44.23 
 
 		 135 aa  42  0.003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012858  Rleg_6814  transcriptional regulator, XRE family  37.5 
 
 		 102 aa  41.6  0.004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.745896  normal  1 
 
 
-
 
NC_013205  Aaci_1064  transcriptional regulator, XRE family  36.62 
 
 		 206 aa  40.8  0.006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0300833  n/a   
 
 
-
 
NC_012912  Dd1591_1916  transcriptional regulator, XRE family  42.86 
 
 		 128 aa  40.4  0.008  Dickeya zeae Ech1591  Bacteria  normal  0.0812721  n/a   
 
 
-
 
NC_009719  Plav_2161  helix-turn-helix domain-containing protein  37.1 
 
 		 126 aa  40  0.01  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
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