73 homologs were found in PanDaTox collection
for query gene Bind_3516 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_3516  filamentation induced by cAMP protein Fic  100 
 
 
207 aa  431  1e-120  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.438285 
 
 
-
 
NC_007925  RPC_3396  filamentation induced by cAMP protein Fic  36.31 
 
 
222 aa  131  7.999999999999999e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.342322  normal  0.190487 
 
 
-
 
NC_010581  Bind_0293  filamentation induced by cAMP protein Fic  32.26 
 
 
219 aa  119  3e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0753  filamentation induced by cAMP protein Fic  31.97 
 
 
386 aa  68.2  0.00000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.424532  n/a   
 
 
-
 
NC_012880  Dd703_3428  filamentation induced by cAMP protein Fic  32.58 
 
 
380 aa  67.8  0.0000000001  Dickeya dadantii Ech703  Bacteria  normal  0.469085  n/a   
 
 
-
 
NC_013421  Pecwa_0711  filamentation induced by cAMP protein Fic  32.58 
 
 
380 aa  65.9  0.0000000004  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_4061  filamentation induced by cAMP protein Fic  32.65 
 
 
397 aa  63.5  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009441  Fjoh_4508  filamentation induced by cAMP protein Fic  28.06 
 
 
317 aa  58.2  0.00000008  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2564  filamentation induced by cAMP protein Fic  32.28 
 
 
243 aa  57.8  0.0000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008757  Pnap_4423  filamentation induced by cAMP protein Fic  32.88 
 
 
407 aa  57  0.0000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.395598 
 
 
-
 
NC_013173  Dbac_2534  filamentation induced by cAMP protein Fic  32.8 
 
 
397 aa  56.6  0.0000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  29.82 
 
 
380 aa  55.8  0.0000004  Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_009708  YpsIP31758_0896  Fic family protein  29.82 
 
 
380 aa  55.8  0.0000004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  29.82 
 
 
380 aa  55.8  0.0000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2616  death-on-curing family protein  32.73 
 
 
261 aa  55.8  0.0000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  29.66 
 
 
394 aa  55.5  0.0000005  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_013512  Sdel_0460  filamentation induced by cAMP protein Fic  30.7 
 
 
388 aa  55.1  0.0000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  31.52 
 
 
267 aa  54.3  0.000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  31.52 
 
 
267 aa  54.3  0.000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3790  filamentation induced by cAMP protein Fic  28.28 
 
 
402 aa  53.5  0.000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4190  filamentation induced by cAMP protein Fic  35.48 
 
 
367 aa  53.5  0.000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1551  hypothetical protein  26.72 
 
 
314 aa  53.1  0.000003  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0445  filamentation induced by cAMP protein Fic  29.79 
 
 
401 aa  52.8  0.000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2696  filamentation induced by cAMP protein Fic  25.82 
 
 
253 aa  52.4  0.000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0426  filamentation induced by cAMP protein Fic  28.95 
 
 
417 aa  52.4  0.000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.444251  n/a   
 
 
-
 
NC_010725  Mpop_2298  filamentation induced by cAMP protein Fic  31.62 
 
 
413 aa  52  0.000006  Methylobacterium populi BJ001  Bacteria  normal  0.266378  normal  0.174945 
 
 
-
 
NC_009727  CBUD_1335  Fic family protein  26.04 
 
 
252 aa  51.6  0.000008  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.324562  n/a   
 
 
-
 
NC_008751  Dvul_2613  filamentation induced by cAMP protein Fic  33 
 
 
248 aa  50.8  0.00001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.427308  normal 
 
 
-
 
NC_010814  Glov_0093  filamentation induced by cAMP protein Fic  31.65 
 
 
404 aa  51.2  0.00001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0896  filamentation induced by cAMP protein Fic  25.24 
 
 
406 aa  50.8  0.00001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_002978  WD0346  Fic family protein  28.89 
 
 
360 aa  50.4  0.00002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.361104  n/a   
 
 
-
 
NC_007514  Cag_0452  fic family protein  31.82 
 
 
261 aa  49.7  0.00003  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  28.17 
 
 
348 aa  49.3  0.00004  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  28.17 
 
 
348 aa  49.3  0.00004  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1372  fic family protein  30.77 
 
 
388 aa  48.9  0.00005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2460  filamentation induced by cAMP protein Fic  30.26 
 
 
396 aa  48.5  0.00007  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0937  filamentation induced by cAMP protein Fic  32.26 
 
 
368 aa  47.8  0.0001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2285  filamentation induced by cAMP protein Fic  35.62 
 
 
250 aa  48.1  0.0001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2840  filamentation induced by cAMP protein Fic  32.5 
 
 
411 aa  47.4  0.0002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0851  filamentation induced by cAMP protein Fic  36.47 
 
 
404 aa  47  0.0002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1233  filamentation induced by cAMP protein Fic  26.71 
 
 
248 aa  46.6  0.0003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0160  filamentation induced by cAMP protein Fic  30.88 
 
 
245 aa  45.8  0.0004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.132154  n/a   
 
 
-
 
NC_013204  Elen_3019  filamentation induced by cAMP protein Fic  31.11 
 
 
403 aa  45.4  0.0006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_0095  filamentation induced by cAMP protein Fic  32.94 
 
 
429 aa  45.1  0.0008  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_002978  WD1314  Fic family protein  35.56 
 
 
359 aa  45.1  0.0008  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.148349  n/a   
 
 
-
 
NC_009475  BBta_p0025  putative cAMP-induced filamentation protein  27.55 
 
 
390 aa  43.9  0.001  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.337972 
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  39.24 
 
 
256 aa  44.7  0.001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1049  Fic family protein  24.85 
 
 
271 aa  44.3  0.001  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000030649  normal 
 
 
-
 
NC_009975  MmarC6_0055  filamentation induced by cAMP protein Fic  30.95 
 
 
434 aa  44.3  0.001  Methanococcus maripaludis C6  Archaea  normal  0.0125874  n/a   
 
 
-
 
NC_008752  Aave_4624  filamentation induced by cAMP protein Fic  25.45 
 
 
397 aa  43.5  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.946577 
 
 
-
 
NC_013161  Cyan8802_0201  filamentation induced by cAMP protein Fic  32.35 
 
 
488 aa  43.9  0.002  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00496594 
 
 
-
 
NC_011769  DvMF_2568  filamentation induced by cAMP protein Fic  29.5 
 
 
410 aa  43.5  0.002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009430  Rsph17025_4217  hypothetical protein  31.39 
 
 
400 aa  43.5  0.002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.921636  normal  0.168634 
 
 
-
 
NC_008781  Pnap_1899  filamentation induced by cAMP protein Fic  25.56 
 
 
511 aa  42.7  0.003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.669104  normal  0.246162 
 
 
-
 
NC_011832  Mpal_1350  filamentation induced by cAMP protein Fic  31.94 
 
 
443 aa  43.1  0.003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.470357 
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  32.86 
 
 
328 aa  43.1  0.003  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_009943  Dole_1842  filamentation induced by cAMP protein Fic  33.8 
 
 
417 aa  42.7  0.004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0601  hypothetical protein  27.7 
 
 
321 aa  42.4  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0903  filamentation induced by cAMP protein Fic  30 
 
 
347 aa  42.4  0.005  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.000226959 
 
 
-
 
NC_013739  Cwoe_5696  filamentation induced by cAMP protein Fic  29.9 
 
 
358 aa  42  0.006  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00196433  normal 
 
 
-
 
NC_013158  Huta_2627  filamentation induced by cAMP protein Fic  27.66 
 
 
384 aa  42  0.006  Halorhabdus utahensis DSM 12940  Archaea  normal  0.828217  n/a   
 
 
-
 
NC_007964  Nham_4032  hypothetical protein  34.48 
 
 
224 aa  41.6  0.007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0995  filamentation induced by cAMP protein Fic  29.36 
 
 
386 aa  42  0.007  Opitutus terrae PB90-1  Bacteria  normal  0.0390266  hitchhiker  0.00286673 
 
 
-
 
NC_009637  MmarC7_1455  filamentation induced by cAMP protein Fic  32.94 
 
 
429 aa  42  0.007  Methanococcus maripaludis C7  Archaea  normal  0.184885  normal  0.0996953 
 
 
-
 
NC_007575  Suden_0227  filamentation induced by cAMP protein Fic  26.32 
 
 
376 aa  41.6  0.008  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.0000000424748  n/a   
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  30.77 
 
 
251 aa  41.6  0.008  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_010501  PputW619_2025  filamentation induced by cAMP protein Fic  27.52 
 
 
507 aa  41.6  0.008  Pseudomonas putida W619  Bacteria  normal  0.509627  normal 
 
 
-
 
NC_011830  Dhaf_0086  filamentation induced by cAMP protein Fic  29.07 
 
 
304 aa  41.6  0.009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1908  hypothetical protein  29.53 
 
 
395 aa  41.2  0.01  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.396319 
 
 
-
 
NC_002967  TDE0061  fic family protein  37.84 
 
 
348 aa  41.2  0.01  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3251  filamentation induced by cAMP protein Fic  27.56 
 
 
393 aa  41.6  0.01  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0798212  n/a   
 
 
-
 
NC_009654  Mmwyl1_0276  filamentation induced by cAMP protein Fic  24.09 
 
 
498 aa  41.2  0.01  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0828  filamentation induced by cAMP protein Fic  26.67 
 
 
509 aa  41.2  0.01  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
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