146 homologs were found in PanDaTox collection
for query gene RPC_3396 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_3396  filamentation induced by cAMP protein Fic  100 
 
 
222 aa  453  1e-127  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.342322  normal  0.190487 
 
 
-
 
NC_010581  Bind_0293  filamentation induced by cAMP protein Fic  50 
 
 
219 aa  204  8e-52  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3516  filamentation induced by cAMP protein Fic  36.31 
 
 
207 aa  131  9e-30  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.438285 
 
 
-
 
NC_009441  Fjoh_4508  filamentation induced by cAMP protein Fic  32.54 
 
 
317 aa  76.3  0.0000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  33.15 
 
 
267 aa  74.7  0.000000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  32.61 
 
 
267 aa  74.3  0.000000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2564  filamentation induced by cAMP protein Fic  32.64 
 
 
243 aa  68.9  0.00000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1233  filamentation induced by cAMP protein Fic  36.76 
 
 
248 aa  67  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1551  hypothetical protein  30.77 
 
 
314 aa  67.4  0.0000000002  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0460  filamentation induced by cAMP protein Fic  30.07 
 
 
388 aa  66.2  0.0000000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3916  Fic family protein  39.42 
 
 
431 aa  65.9  0.0000000005  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4959  Fic family protein  39.42 
 
 
431 aa  65.9  0.0000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2613  filamentation induced by cAMP protein Fic  40 
 
 
248 aa  63.5  0.000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.427308  normal 
 
 
-
 
NC_008346  Swol_2548  hypothetical protein  26.67 
 
 
348 aa  63.5  0.000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1335  Fic family protein  32.65 
 
 
252 aa  62.4  0.000000005  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.324562  n/a   
 
 
-
 
NC_007519  Dde_2494  hypothetical protein  28.97 
 
 
342 aa  60.8  0.00000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2194  filamentation induced by cAMP protein Fic  33.13 
 
 
400 aa  60.1  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  32.61 
 
 
394 aa  60.5  0.00000002  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_009943  Dole_0416  filamentation induced by cAMP protein Fic  31.5 
 
 
336 aa  60.5  0.00000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  29.66 
 
 
348 aa  59.7  0.00000003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  29.66 
 
 
348 aa  59.7  0.00000004  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_013739  Cwoe_5696  filamentation induced by cAMP protein Fic  27.98 
 
 
358 aa  59.3  0.00000004  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00196433  normal 
 
 
-
 
NC_013173  Dbac_0753  filamentation induced by cAMP protein Fic  28.03 
 
 
386 aa  59.3  0.00000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.424532  n/a   
 
 
-
 
NC_002978  WD0346  Fic family protein  28.1 
 
 
360 aa  58.9  0.00000006  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.361104  n/a   
 
 
-
 
NC_008346  Swol_0160  filamentation induced by cAMP protein Fic  34.4 
 
 
245 aa  58.5  0.00000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.132154  n/a   
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  33.94 
 
 
328 aa  58.5  0.00000007  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_008463  PA14_28800  hypothetical protein  30.59 
 
 
331 aa  58.2  0.0000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000287413  decreased coverage  0.000000000406133 
 
 
-
 
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  34.38 
 
 
247 aa  58.2  0.0000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_013421  Pecwa_0711  filamentation induced by cAMP protein Fic  27.16 
 
 
380 aa  57.4  0.0000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1403  MloA  25 
 
 
359 aa  57  0.0000002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.10524  n/a   
 
 
-
 
NC_012880  Dd703_3428  filamentation induced by cAMP protein Fic  27.01 
 
 
380 aa  57.4  0.0000002  Dickeya dadantii Ech703  Bacteria  normal  0.469085  n/a   
 
 
-
 
NC_013530  Xcel_3251  filamentation induced by cAMP protein Fic  30.43 
 
 
393 aa  56.6  0.0000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0798212  n/a   
 
 
-
 
NC_012791  Vapar_3790  filamentation induced by cAMP protein Fic  32.2 
 
 
402 aa  56.2  0.0000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2568  filamentation induced by cAMP protein Fic  29.41 
 
 
410 aa  56.2  0.0000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007955  Mbur_1635  filamentation induced by cAMP protein Fic  29.01 
 
 
326 aa  55.8  0.0000005  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1350  filamentation induced by cAMP protein Fic  28.85 
 
 
443 aa  55.5  0.0000006  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.470357 
 
 
-
 
NC_011663  Sbal223_3472  filamentation induced by cAMP protein Fic  28.66 
 
 
333 aa  55.5  0.0000006  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0896  Fic family protein  31.82 
 
 
380 aa  55.1  0.0000009  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  31.82 
 
 
380 aa  55.1  0.0000009  Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  31.82 
 
 
380 aa  55.1  0.0000009  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2641  Fic family protein  30.53 
 
 
328 aa  54.3  0.000002  Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000103829  n/a   
 
 
-
 
NC_008345  Sfri_1955  filamentation induced by cAMP protein Fic  28.83 
 
 
333 aa  54.3  0.000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.484154  n/a   
 
 
-
 
NC_008609  Ppro_2285  filamentation induced by cAMP protein Fic  35.51 
 
 
250 aa  53.9  0.000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2669  Fic family protein  27.74 
 
 
330 aa  53.9  0.000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2545  filamentation induced by cAMP protein Fic  32.81 
 
 
247 aa  53.9  0.000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.992105  normal 
 
 
-
 
NC_007955  Mbur_1532  filamentation induced by cAMP protein Fic  41.67 
 
 
438 aa  53.5  0.000003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013521  Sked_33230  hypothetical protein  32.88 
 
 
408 aa  53.1  0.000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2460  filamentation induced by cAMP protein Fic  33.06 
 
 
396 aa  53.1  0.000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3863  filamentation induced by cAMP protein Fic  29.69 
 
 
334 aa  52.8  0.000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0343511 
 
 
-
 
NC_008781  Pnap_1899  filamentation induced by cAMP protein Fic  29.63 
 
 
511 aa  52.8  0.000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.669104  normal  0.246162 
 
 
-
 
NC_009635  Maeo_0664  filamentation induced by cAMP protein Fic  27.12 
 
 
434 aa  52.4  0.000005  Methanococcus aeolicus Nankai-3  Archaea  normal  0.0557891  n/a   
 
 
-
 
NC_008786  Veis_3636  filamentation induced by cAMP protein Fic  28.24 
 
 
353 aa  51.6  0.00001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.791773  normal 
 
 
-
 
NC_013169  Ksed_25050  hypothetical protein  33.85 
 
 
397 aa  51.6  0.00001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0061  fic family protein  26.5 
 
 
348 aa  50.8  0.00002  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4789  filamentation induced by cAMP protein Fic  39.33 
 
 
282 aa  50.8  0.00002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0095  filamentation induced by cAMP protein Fic  25 
 
 
429 aa  50.1  0.00002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1455  filamentation induced by cAMP protein Fic  24.66 
 
 
429 aa  50.4  0.00002  Methanococcus maripaludis C7  Archaea  normal  0.184885  normal  0.0996953 
 
 
-
 
NC_009975  MmarC6_0055  filamentation induced by cAMP protein Fic  24.66 
 
 
434 aa  50.4  0.00002  Methanococcus maripaludis C6  Archaea  normal  0.0125874  n/a   
 
 
-
 
NC_002978  WD1314  Fic family protein  30 
 
 
359 aa  49.7  0.00003  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.148349  n/a   
 
 
-
 
NC_013216  Dtox_3993  filamentation induced by cAMP protein Fic  28.08 
 
 
353 aa  50.1  0.00003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.284344 
 
 
-
 
NC_008609  Ppro_1856  Fis family transcriptional regulator  31.3 
 
 
328 aa  50.1  0.00003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0601  filamentation induced by cAMP protein Fic  33.62 
 
 
408 aa  49.7  0.00003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0913  filamentation induced by cAMP protein Fic  25.42 
 
 
245 aa  49.3  0.00004  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.876617  n/a   
 
 
-
 
NC_008309  HS_1262  hypothetical protein  24.48 
 
 
249 aa  49.3  0.00005  Haemophilus somnus 129PT  Bacteria  normal  0.254788  n/a   
 
 
-
 
NC_010501  PputW619_4356  filamentation induced by cAMP protein Fic  32.26 
 
 
443 aa  49.3  0.00005  Pseudomonas putida W619  Bacteria  normal  0.871364  normal  0.139855 
 
 
-
 
NC_007514  Cag_0182  Fic family protein  25.58 
 
 
352 aa  48.5  0.00007  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2116  filamentation induced by cAMP protein Fic  33.65 
 
 
426 aa  48.5  0.00007  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_006369  lpl2288  hypothetical protein  31.82 
 
 
502 aa  48.5  0.00008  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  30.99 
 
 
256 aa  48.5  0.00008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  31.3 
 
 
251 aa  47.8  0.0001  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_009675  Anae109_0607  filamentation induced by cAMP protein Fic  33.03 
 
 
412 aa  48.1  0.0001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_03140  hypothetical protein  27.34 
 
 
331 aa  48.1  0.0001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.148194  hitchhiker  0.000000000000117198 
 
 
-
 
NC_011898  Ccel_2696  filamentation induced by cAMP protein Fic  35.51 
 
 
253 aa  48.1  0.0001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1798  filamentation induced by cAMP protein Fic  36.26 
 
 
427 aa  47.8  0.0001  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.000000635308  n/a   
 
 
-
 
NC_007778  RPB_3058  filamentation induced by cAMP protein Fic  29.63 
 
 
541 aa  47  0.0002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0777  filamentation induced by cAMP protein Fic  30 
 
 
356 aa  47  0.0002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.4104  n/a   
 
 
-
 
NC_009430  Rsph17025_4217  hypothetical protein  35.71 
 
 
400 aa  47.4  0.0002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.921636  normal  0.168634 
 
 
-
 
NC_009483  Gura_0426  filamentation induced by cAMP protein Fic  35.78 
 
 
417 aa  47.4  0.0002  Geobacter uraniireducens Rf4  Bacteria  normal  0.444251  n/a   
 
 
-
 
NC_013411  GYMC61_1541  filamentation induced by cAMP protein Fic  28.08 
 
 
364 aa  47  0.0002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3247  hypothetical protein  30 
 
 
377 aa  47  0.0002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.199811  normal  0.982755 
 
 
-
 
NC_010814  Glov_0093  filamentation induced by cAMP protein Fic  43.94 
 
 
404 aa  47.4  0.0002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0191  filamentation induced by cAMP protein Fic  30 
 
 
508 aa  47.4  0.0002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1723  MloA protein, putative  26.97 
 
 
356 aa  46.2  0.0003  Campylobacter jejuni RM1221  Bacteria  normal  0.325605  n/a   
 
 
-
 
NC_011901  Tgr7_3297  mobile mystery protein B  30.46 
 
 
195 aa  46.6  0.0003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.541962  n/a   
 
 
-
 
NC_013204  Elen_0755  filamentation induced by cAMP protein Fic  38.03 
 
 
226 aa  46.6  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.973476 
 
 
-
 
NC_008228  Patl_1889  filamentation induced by cAMP protein Fic  29.03 
 
 
454 aa  46.6  0.0003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0625  filamentation induced by cAMP protein Fic  27.13 
 
 
392 aa  46.6  0.0003  Methanococcus maripaludis C5  Archaea  normal  0.849792  n/a   
 
 
-
 
NC_009483  Gura_2737  filamentation induced by cAMP protein Fic  33.33 
 
 
251 aa  46.6  0.0003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0264056  n/a   
 
 
-
 
NC_011830  Dhaf_0086  filamentation induced by cAMP protein Fic  32.18 
 
 
304 aa  46.2  0.0003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2833  filamentation induced by cAMP protein Fic  25.91 
 
 
512 aa  46.2  0.0004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0731  filamentation induced by cAMP protein Fic  29.91 
 
 
446 aa  46.2  0.0004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4190  filamentation induced by cAMP protein Fic  32.14 
 
 
367 aa  45.8  0.0005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3761  filamentation induced by cAMP protein Fic  35 
 
 
430 aa  45.8  0.0005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.651271  n/a   
 
 
-
 
NC_002939  GSU1391  Fic family protein  29.85 
 
 
194 aa  45.4  0.0006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1912  putative MloA protein  26.4 
 
 
356 aa  45.8  0.0006  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6451  filamentation induced by cAMP protein Fic  29.58 
 
 
378 aa  45.8  0.0006  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0184045 
 
 
-
 
NC_009975  MmarC6_0037  filamentation induced by cAMP protein Fic  27.13 
 
 
392 aa  45.4  0.0006  Methanococcus maripaludis C6  Archaea  normal  0.450631  n/a   
 
 
-
 
NC_011004  Rpal_1106  filamentation induced by cAMP protein Fic  26.49 
 
 
533 aa  45.4  0.0007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00876  filamentation induced by cAMP protein Fic  28.67 
 
 
447 aa  45.4  0.0007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0276  filamentation induced by cAMP protein Fic  34.12 
 
 
498 aa  45.1  0.0008  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
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