Gene Phep_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0903 
Symbol 
ID8251997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1057359 
End bp1058402 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content37% 
IMG OID644934558 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003091187 
Protein GI255530815 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000226959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATTA ACTCACTTAA TATAACGTCC GAGATTTTAA ACATTATTGC CGGCATAGAC 
GAATTTAAAG GCAGCTGGAA GGTATTAGGC AATCTCGCAC CTGAACAATT AATATCGTTG
CGTAGGGTTG CTACTATCGA AAGTATAGGC TCATCAACCC GTATAGAGGG GAGTAAGTTA
AGTGACAAGC AAGTGGAGGT ACTGCTTTCT AATTTACAAA TTCAAAAATT TGAAAACCGA
GACGAGCAGG AAGTTGCAGG ATATGCAGCT GTAATGAATA CTCTTTTTGA AAATTACCAG
GAAATTCCGC TTACTGAAAA TTATATACGT CAGTTTCACA GAGATTTATT GAAATATAGT
GATAAAGACT CCCGACATCG CGGTGAATAT AAAAAGCATA ATAATCAAGT GGAAGCATTT
GATGCAAGTG GAAAAAGCGT GGGAGTTGTT TTTGTTACGG CCACGCCATT TGATACTCCA
TTACGAATGC AACATTTGAT CGCATGGACA AATGATACAC TGGCTAATAA ATCCTTGCAT
CCAATATTGG TGACGGCTAT TTTTGTTGTA GAATTTTTGG CCATACACCC GTTTCAAGAT
GGCAATGGAA GGCTTTCAAG AGCATTAACT ACTTATTTAT TGTTATCAGC AGGATATGCT
TATGTCCCAT ACAGTTCATT GGAATCTATT ATAGAACATA GTAAAGAAGG ATATTATCTG
GCACTTAGAC AAACTCAGGG TACCTTAGAA AATGATAATC CTGACTGGCA ACCCTGGATC
ATGTTTTTCC TGAAAGCTTT GTTAAAGCAA AAGCAAAGAC TGGAAACTAA ACTCGACAAG
GAATATCTGC TATTGGGTCA ACTTCCCCAA TTGTCTTTAG ATATTTTAGA ACTGGTAAAG
TCCCGGGGTC AACTAACGAT TAGTGATATT GTAGTGATTA CAAAGGCCAA TAGAAATACA
ATTAAAAAGC ATTTAGAAAA TCTGGTATTG CGAAACCAGA TTCAAAAACA TGGAATAGGC
AAAGGCACCT TTTATACCCG ATAG
 
Protein sequence
MKINSLNITS EILNIIAGID EFKGSWKVLG NLAPEQLISL RRVATIESIG SSTRIEGSKL 
SDKQVEVLLS NLQIQKFENR DEQEVAGYAA VMNTLFENYQ EIPLTENYIR QFHRDLLKYS
DKDSRHRGEY KKHNNQVEAF DASGKSVGVV FVTATPFDTP LRMQHLIAWT NDTLANKSLH
PILVTAIFVV EFLAIHPFQD GNGRLSRALT TYLLLSAGYA YVPYSSLESI IEHSKEGYYL
ALRQTQGTLE NDNPDWQPWI MFFLKALLKQ KQRLETKLDK EYLLLGQLPQ LSLDILELVK
SRGQLTISDI VVITKANRNT IKKHLENLVL RNQIQKHGIG KGTFYTR