15 homologs were found in PanDaTox collection
for query gene Avi_7646 on replicon NC_011981
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011981  Avi_7646  TPR repeat-containing protein  100 
 
 		 529 aa  1075    Agrobacterium vitis S4  Bacteria  normal  0.158995  n/a   
 
 
-
 
NC_007802  Jann_1578  SARP family transcriptional regulator  26.02 
 
 		 530 aa  140  3.9999999999999997e-32  Jannaschia sp. CCS1  Bacteria  normal  0.584481  normal  1 
 
 
-
 
NC_007802  Jann_3528  SARP family transcriptional regulator  26.46 
 
 		 539 aa  141  3.9999999999999997e-32  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.0172625 
 
 
-
 
NC_008687  Pden_3925  SARP family transcriptional regulator  27.89 
 
 		 528 aa  131  3e-29  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_2958  SARP family transcriptional regulator  26.44 
 
 		 644 aa  130  7.000000000000001e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.30707  normal  0.853466 
 
 
-
 
NC_009428  Rsph17025_2731  SARP family transcriptional regulator  25.26 
 
 		 644 aa  127  6e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.92 
 
 
-
 
NC_012848  Rleg_5023  transcriptional regulator, SARP family  23.78 
 
 		 623 aa  105  2e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.494336  normal  0.650955 
 
 
-
 
NC_007493  RSP_1299  hypothetical protein  39.55 
 
 		 644 aa  99  2e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.135233  n/a   
 
 
-
 
NC_009952  Dshi_0870  transcriptional regulator  23.99 
 
 		 679 aa  77.8  0.0000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.918273 
 
 
-
 
NC_007958  RPD_0968  TPR repeat-containing protein  29.89 
 
 		 584 aa  58.5  0.0000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_2258  SARP family transcriptional regulator  32.28 
 
 		 647 aa  57.8  0.0000006  Jannaschia sp. CCS1  Bacteria  normal  0.0203775  normal  1 
 
 
-
 
NC_011004  Rpal_5193  Tetratricopeptide TPR_2 repeat protein  23.34 
 
 		 582 aa  53.9  0.000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.117733  n/a   
 
 
-
 
NC_009427  Saro_3797  SARP family transcriptional regulator  33.81 
 
 		 584 aa  53.5  0.00001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.231924  n/a   
 
 
-
 
NC_008044  TM1040_0538  SARP family transcriptional regulator  26.23 
 
 		 266 aa  46.6  0.001  Ruegeria sp. TM1040  Bacteria  normal  0.224574  normal  1 
 
 
-
 
NC_007778  RPB_0861  TPR repeat-containing protein  31.94 
 
 		 580 aa  46.2  0.002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
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