| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0538 |
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| Symbol | |
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| ID | 4077185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 570587 |
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| End bp | 571387 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005834 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_612533 |
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| Protein GI | 99080379 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.224574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTAG TTTTGAAAGT ACGTCAATAC GGCGCGTTTG GTGTCTACAG ACCCGACGGA
GAACCCATTC AACTTGGTGC GAAACACCAG GCGCTCATGG CGCTGATGGT GACAGCGGAA
GAAGGGGTTC GAACGCGCGC ATTTCTCGAA CACACGCTTT GGAGTTTTGC GCAGCCGGAA
CAGGCCAAGG CGAGCTTGCG AACGGCGCTC TCCACCCTGA GAAAACACAT CGGGCCGACC
GCTTCTGCCG CTTTCAAGGC CAATCGCGAG CGCGTCACGC TCGATTTGAG CATGATCGAA
GTGGAGCGCG ATCCGGCAAG GGGTGAATTT ATGGAAGGCT TTGAGCTTCC ACATGAAAAT
GCCTTTTCGG AGTGGCTTTC TGAAATGCGG TCTCAGGCCT CCGGGACGGC AAGCGTCGCG
CAAGAACAGC CTTGGGCGCC ACGTGACAGG AGCCGCGTCA TCCTGGACGA GTTGCTCCCC
TCCATCGCAG TCTTGCCTTT TGCCCAGCGT GCGCCCGGAG GGTCGACCGC GCCGCTTGGT
GCGATCCTGT CGGAGGAACT GTCGCGACAG TTGTCACGCA GTCAGGCGTT CTCTGTCACC
TCATATCTGG CGTCGCGCCA ATTCAGCCTC GAGGATGTGC GCCCAGCCGA AGTCTCCTCG
GTCGCTGGCG TAAGCTATCT GGTCTCTGGT TCCGTTTTTG TTAGGGTCAC GATTTTATTG
CGCAAATTGA TTTGCATGAC GCGCATCGGG AAAAAGTCAT TTGGTCGCGG GAGTTTCGTG
GGAGCCTTTC GGATTTGTTA A
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| Protein sequence | MVVVLKVRQY GAFGVYRPDG EPIQLGAKHQ ALMALMVTAE EGVRTRAFLE HTLWSFAQPE
QAKASLRTAL STLRKHIGPT ASAAFKANRE RVTLDLSMIE VERDPARGEF MEGFELPHEN
AFSEWLSEMR SQASGTASVA QEQPWAPRDR SRVILDELLP SIAVLPFAQR APGGSTAPLG
AILSEELSRQ LSRSQAFSVT SYLASRQFSL EDVRPAEVSS VAGVSYLVSG SVFVRVTILL
RKLICMTRIG KKSFGRGSFV GAFRIC
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