| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1578 |
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| Symbol | |
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| ID | 3934026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1559393 |
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| End bp | 1560985 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903929 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_509520 |
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| Protein GI | 89054069 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.584481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAG CGAGCTACAA ACTCTTCCTG ATCGGCCCGT TTCGGCTGAC GGCCCCGTCA
GGCGAAATCG TTGACATCAA AGGCAAAAAG TCACGTGCGA TTTTGGCCGC CCTGGGCACG
GGGCGCGATA TGGCGCGGGC GCGGTCGTGG ATCGCGGCGC ATCTCTGGAG CGGTCGCGGC
GCGGCTCAGG CGGCGGCCAG CTACCGTCAG TGCATTCTGG AACTGCGCCG CGCACTGGGC
GCGGATGCCG ATCTTCTGGA TTCGGGCACC GACATGGTTG CGCTAGACCC GGCGCGGGTC
TGGGTGGATG CCGTGGACGA GGAACACCTG ACGCAGCTGT CTGATGGTAT GGGGGAGACG
CCGCAATTTC TGGCCGATCT CAGCATCCGC GATCCGGAGT TTGAACGTTG GGTGGCCGAC
CGTCGCACCT ATTACGGGCG CAGGCTCTCA CCCGCACCAC CACCGCCACC GCAGACCAAG
CGCCTGCACC GGCCCATCGT CATCCGGACG CGCCCGGAGG GGGCCGCCGC GGCGCAGACC
TACAACGCCG TGTTGCAGGA CCTGATCTGC AAAAGCATCG ACGATACCGG CAAGGTTCGG
CTGCTGGATG AGGGGGCGAT GCCCGGTCTC ACGCGCGATG ATGCCGACCG GGCCTTCCGG
GTGGAGGTCA GCTCGGTTGA GATGCCGGGC ACCAAGGGCG TTTCTGTCAA TCTCACGCGG
TCGCTTGACG GGACGGTGTT CACCACGCTC ACGCGCCTGT CCGAGAGTGT GGACATGATT
GATCTGGTCA ATGAGGCGGT CGTGCAATCC CTCGATGAGA TCGCGGGCTA TGAGGCGCAG
CTGCCATCGG CCAAGATCGC CACGGCCATG TGTTTTCGCG CGATGCAATC CATCACCGAC
TACGCCCCCA CCACGATTGA GGCCGCCGAC CGCCTGATCT CAAACGCCTA CGAGATTGAC
CCGCAGCCCG TCTTTCTGGC CTGGCGCGCC TATCTGCGCA CGTTTTTGTT GGGCGAAAGC
GGTGGCGGAA ATTCCCAGGC CATCAGCGAA GAGATGGAGC GCTTCATCAA CCTGGCCGAG
GAACGGGAGC CGGGCAATTC CATCATTCTG TCACTGGCGG CCTTCATCCG GTCCATGTGG
CTCTTGTCCA GTGAAGACGC GCTGGATCTG GCGCAGCGCA GCCATGCGCT CAACCCCAGC
AATCCCTACG GGATCTCGTA TCTCGGGATG GTCCATACCC ATCTGGGCAA TTTTGAGGAA
GGCTACCGCC TGACCCGCCG GGCCAATGCT TTGACCGTGC CGCGCGGGGC GAAATCCTCG
ATCCGCTATG TCGCGATGCG GTCTGCCGCC TGTGCGGGGC GGTATACGGA GGCGATCAAG
ATCGGCGAGG CTCTGGGCCG CGATGCCCCC CATTTCGTGG CCCCCAAACG CCTGATGGGG
CTGCTCTACA TGAAATGCGG GCGGGTGGCC GATGCGGAGG CGATGGTCGA GACCCTGCGC
CAGCACGAGC CGGACTATAG TATGGAGAAG ATGCGCGACG CCTTCCGCGC CTCCCCGCTG
CTCCATCGCA GCAAACTGGG CAAGGCAGGG TAG
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| Protein sequence | MAEASYKLFL IGPFRLTAPS GEIVDIKGKK SRAILAALGT GRDMARARSW IAAHLWSGRG
AAQAAASYRQ CILELRRALG ADADLLDSGT DMVALDPARV WVDAVDEEHL TQLSDGMGET
PQFLADLSIR DPEFERWVAD RRTYYGRRLS PAPPPPPQTK RLHRPIVIRT RPEGAAAAQT
YNAVLQDLIC KSIDDTGKVR LLDEGAMPGL TRDDADRAFR VEVSSVEMPG TKGVSVNLTR
SLDGTVFTTL TRLSESVDMI DLVNEAVVQS LDEIAGYEAQ LPSAKIATAM CFRAMQSITD
YAPTTIEAAD RLISNAYEID PQPVFLAWRA YLRTFLLGES GGGNSQAISE EMERFINLAE
EREPGNSIIL SLAAFIRSMW LLSSEDALDL AQRSHALNPS NPYGISYLGM VHTHLGNFEE
GYRLTRRANA LTVPRGAKSS IRYVAMRSAA CAGRYTEAIK IGEALGRDAP HFVAPKRLMG
LLYMKCGRVA DAEAMVETLR QHEPDYSMEK MRDAFRASPL LHRSKLGKAG
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