| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0968 |
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| Symbol | |
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| ID | 4021443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1094912 |
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| End bp | 1096666 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961159 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_568107 |
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| Protein GI | 91975448 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGA CGTCAGCGCG TTTCATTCTC AATTTGCTGG GCCCCTTCGG ACTGGTCGCG
CCGAGCGGGG ATCGCATCGA GATTTCCAGC AAGAAGGGTA CCGCGGTCAT CGCGATCCTT
GCGATGTCGC GCGACGGCGA ACGCGCGCGC GGCTGGCTGC AGGAACGGCT ATGGGGCAGC
CGAGGTCATG CCGAAGCAGC GGGAAGCCTG CGCCGCGAAC TCTCCAATCT TCGAAAGCTC
CTCAACGTCG GCGGCGCCAG CCTGCTGGTC AGCGACCGCG ATCGCATTGG TCTGCGGCTC
GATTTGATCG AGGTCGATGC GCTCGCTCCG AACGCCGACC CGAAAATTGC GGGCGAGTTT
CTCGAAGGCC TCGATATCAC CGGCGAAGCG GGCTTTCGCG ACTGGCTGCG CGAGCAGCGC
GCGACGCTGT TGCGCGGATC ACGCGCGCCG TCGCTCCCCG GGCTGCCGGG CGCGCTGCCG
AGACACATTC TCGATACCAG CCAGCCGCCG GTCGGCTTCA GCGGCAATCA GGCGATCGCG
GTGCTGCCGT TCACCAATGT TACCGGTGAC GAGGCGCTGG ACTATATCTC CGAGGGCATC
AGCGAAGAGC TGATCGTCGG GCTGTCCCGG ATCCGCTGGC TGCCGGTGAT CGCGCGCAGT
TCGAGCTTCT CCTTCGCGGA CACGATCGAC CGCAAGGTGA TCGGGCAGCG GCTCGGCGCG
CATTATCTGA TCGAGGGGCA TCTCTACCGC GCCTATGATT CCTTCGGCGT CTCCGCCAGC
CTGTCGGAGG CAATGACCGG CTACGCAATC TGGTCGCGGC GCTTCACGCT GCAATCACCC
GCGATGCGCG GTGAACTCGA GCAGTTCGTC AACGAGCTGG TGGCGCAGCT CGAAACCAAG
ATCGAGCACG CCGAGCAGAT TCGCATCCGC AACAAGCGTC AGGACACGCT CGGCGTCAGC
GATCTGATCT GGCGCGGGCG CTGGCATCTC AACCGGCTGA CCCGCGCCGA TTCCGAGATG
GCGCAGAAGC TGTTCGCCGA CGCGCTCGCG CTCGATCCCA AATCGCCGGA GGCGCTGATC
CAGACGACCT CGGCGCTGGC GTGGTCGATC TGGGCCGGAC GGCAGCCGCA AGAGCAGGTC
CTGCGGATGC GCAAGCTGGC GCAGCAGGCA AGCCTCGCCG ATCCGGACGA CGGTCGCGGC
TTCATGCTCG CCGGCATCGC CGAGATGTGG CTGCGCCATC CGCAGGAAGC GAAGAATCTG
CTGCAGCACG CGATCGCGCT CAATCCGAGT CTGGCGCTGG CACATGCGCA GCTCGGCGGT
TGCTACAATC TCGCCGGAGA GCCGGCGAAG GCGATCGATC ACCTCCGTGC GTCGATGCGG
CTCAGCCTGA ACGACCCGAA CATCTTCTAC GCGCTCGGCG AGATGGCGCT CGCCTACACC
ATGCTCGGGC GCTGGGCCGA GGCGGCCGAA CATGCGTCGC TGTCGCTCGC CCGGCGCCCG
GCCTATTGGT ACGCGCACGT CCTGAAGATC AACGCGCTCG TGCGCAGCGA CAATTTCGCC
GCAGCCCGCG TCGCGACCGA TGAACTACTT GCTGTCAAGC CGAATTTTTC CAGGCATTAC
ATCGATTGGT TGCCGTTTGT TGAGCGAACA TGGATTGACC ATTTCGTGGA AGGCCTGAAA
ATGGTCCCGG GCCGCGATGC GGACTGGCTG GAGCGCGACA GTCAGGAGAG CCCCGCGCAA
TTTCTGCCGA ACTGA
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| Protein sequence | MKATSARFIL NLLGPFGLVA PSGDRIEISS KKGTAVIAIL AMSRDGERAR GWLQERLWGS
RGHAEAAGSL RRELSNLRKL LNVGGASLLV SDRDRIGLRL DLIEVDALAP NADPKIAGEF
LEGLDITGEA GFRDWLREQR ATLLRGSRAP SLPGLPGALP RHILDTSQPP VGFSGNQAIA
VLPFTNVTGD EALDYISEGI SEELIVGLSR IRWLPVIARS SSFSFADTID RKVIGQRLGA
HYLIEGHLYR AYDSFGVSAS LSEAMTGYAI WSRRFTLQSP AMRGELEQFV NELVAQLETK
IEHAEQIRIR NKRQDTLGVS DLIWRGRWHL NRLTRADSEM AQKLFADALA LDPKSPEALI
QTTSALAWSI WAGRQPQEQV LRMRKLAQQA SLADPDDGRG FMLAGIAEMW LRHPQEAKNL
LQHAIALNPS LALAHAQLGG CYNLAGEPAK AIDHLRASMR LSLNDPNIFY ALGEMALAYT
MLGRWAEAAE HASLSLARRP AYWYAHVLKI NALVRSDNFA AARVATDELL AVKPNFSRHY
IDWLPFVERT WIDHFVEGLK MVPGRDADWL ERDSQESPAQ FLPN
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