39 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Emin_0119  CDS  NC_010644  126074  126679  +  606  TetR family transcriptional regulator  YP_001875022  decreased coverage  0.00000000566826  decreased coverage  0.00000000000241144  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0170  CDS  NC_010644  184806  185243  -  438  RDD domain-containing protein  YP_001875071  decreased coverage  0.00000000534855  decreased coverage  0.00967799  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0171  CDS  NC_010644  185266  185688  -  423  RDD domain-containing protein  YP_001875072  decreased coverage  0.0000000652856  decreased coverage  0.0096302  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0172  CDS  NC_010644  185768  186811  -  1044  hypothetical protein  YP_001875073  decreased coverage  0.00000263309  normal  0.0370984  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0224  CDS  NC_010644  239287  241257  +  1971  DNA methylase N-4/N-6 domain-containing protein  YP_001875123  normal  1  decreased coverage  0.0000113178  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0237  CDS  NC_010644  255971  256804  +  834  hypothetical protein  YP_001875136  decreased coverage  0.00000648685  normal  1  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0307  CDS  NC_010644  329133  329813  +  681  methyltransferase  YP_001875204  decreased coverage  0.0000000499795  hitchhiker  0.00000453618  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0311  CDS  NC_010644  332146  332628  -  483  hypothetical protein  YP_001875208  normal  0.0535887  decreased coverage  0.000000645484  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0378  CDS  NC_010644  403637  404194  +  558  LemA family protein  YP_001875272  unclonable  0.000000000407408  decreased coverage  1.42653e-16  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0450  CDS  NC_010644  483570  484046  +  477  hypothetical protein  YP_001875344  decreased coverage  0.00000000742352  hitchhiker  0.00000000466691  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0451  CDS  NC_010644  484220  485131  +  912  hypothetical protein  YP_001875345  hitchhiker  0.000000221433  decreased coverage  0.000000000370346  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0452  CDS  NC_010644  485128  485934  +  807  hypothetical protein  YP_001875346  hitchhiker  0.0000310711  decreased coverage  0.00000000190232  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0483  CDS  NC_010644  514984  516753  +  1770  hypothetical protein  YP_001875376  decreased coverage  0.000000147239  normal  1  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0527  CDS  NC_010644  576255  577607  -  1353  glutamate dehydrogenase  YP_001875419  decreased coverage  0.00000275062  normal  0.153307  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0536  CDS  NC_010644  588143  589744  +  1602  hypothetical protein  YP_001875428  decreased coverage  0.000617435  normal  1  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0606  CDS  NC_010644  662074  662544  +  471  Tfp pilus assembly protein PilE-like protein  YP_001875498  decreased coverage  0.0000101189  hitchhiker  0.000000768083  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0723  CDS  NC_010644  799795  800481  +  687  hypothetical protein  YP_001875615  decreased coverage  0.0000000154861  hitchhiker  0.000000232887  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0812  CDS  NC_010644  889695  894326  -  4632  putative PAS/PAC sensor protein  YP_001875704  normal  1  decreased coverage  0.0000000000000129345  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0813  CDS  NC_010644  894555  894713  +  159  hypothetical protein  YP_001875705  normal  0.069074  decreased coverage  6.33816e-16  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0872  CDS  NC_010644  961114  961872  -  759  SseB family protein  YP_001875764  normal  0.179589  decreased coverage  0.000000000216003  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0876  CDS  NC_010644  964062  965105  -  1044  dienelactone hydrolase  YP_001875768  hitchhiker  0.0000509815  decreased coverage  0.000000000273866  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0877  CDS  NC_010644  965255  966151  +  897  AraC family transcriptional regulator  YP_001875769  hitchhiker  0.000000157744  decreased coverage  0.000000000198967  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0879  CDS  NC_010644  967212  968990  +  1779  ABC transporter related  YP_001875771  unclonable  0.00000000788557  decreased coverage  0.000000000312557  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0880  CDS  NC_010644  968987  970726  +  1740  ABC transporter related  YP_001875772  unclonable  0.0000000105658  decreased coverage  0.000000000323108  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0981  CDS  NC_010644  1070898  1072157  -  1260  hypothetical protein  YP_001875871  hitchhiker  0.00000423266  decreased coverage  3.25567e-17  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0982  CDS  NC_010644  1072154  1072339  -  186  hypothetical protein  YP_001875872  hitchhiker  0.000000266163  decreased coverage  6.55366e-18  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0987  CDS  NC_010644  1073649  1074434  +  786  XRE family transcriptional regulator  YP_001875877  decreased coverage  0.000000124238  decreased coverage  8.983340000000001e-18  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_0988  CDS  NC_010644  1074615  1075481  +  867  hypothetical protein  YP_001875878  hitchhiker  0.0000224979  decreased coverage  1.1597e-17  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1208  CDS  NC_010644  1305593  1306354  -  762  Flp pilus assembly protein CpaB-like protein  YP_001876095  hitchhiker  0.0000207923  decreased coverage  8.378480000000001e-18  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1209  CDS  NC_010644  1306407  1306832  -  426  hypothetical protein  YP_001876096  hitchhiker  0.00000180938  decreased coverage  4.974770000000001e-18  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1210  CDS  NC_010644  1306886  1307083  -  198  hypothetical protein  YP_001876097  hitchhiker  0.00000129075  decreased coverage  4.16934e-18  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1211  CDS  NC_010644  1307125  1307304  -  180  hypothetical protein  YP_001876098  hitchhiker  0.000000213259  decreased coverage  5.3339900000000005e-18  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1212  CDS  NC_010644  1307336  1308310  -  975  hypothetical protein  YP_001876099  unclonable  0.00000000090453  decreased coverage  1.89634e-17  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1213  CDS  NC_010644  1308324  1312517  -  4194  hypothetical protein  YP_001876100  normal  0.0125972  decreased coverage  0.00000000000000140245  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1267  CDS  NC_010644  1367360  1368136  +  777  TraR/DksA family transcriptional regulator  YP_001876154  decreased coverage  0.0000000120418  normal  1  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1427  CDS  NC_010644  1515950  1520107  -  4158  DNA-directed RNA polymerase, beta' subunit  YP_001876313  decreased coverage  0.000823034  normal  1  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1524  CDS  NC_010644  1615615  1616094  -  480  Tfp pilus assembly protein PilE-like protein  YP_001876408  decreased coverage  0.0000000584644  unclonable  2.6975300000000003e-19  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1525  CDS  NC_010644  1616181  1617242  -  1062  recA protein  YP_001876409  decreased coverage  0.0000000245316  unclonable  4.38442e-19  Elusimicrobium minutum Pei191  Bacteria 
 
 
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Emin_1542  CDS  NC_010644  1636266  1637150  -  885  parB-like partition protein  YP_001876426  decreased coverage  0.0000000160995  unclonable  1.80022e-19  Elusimicrobium minutum Pei191  Bacteria 
 
 
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