Gene Emin_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1208 
Symbol 
ID6262971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1305593 
End bp1306354 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content40% 
IMG OID642611686 
ProductFlp pilus assembly protein CpaB-like protein 
Protein accessionYP_001876095 
Protein GI187251613 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3745] Flp pilus assembly protein CpaB 
TIGRFAM ID[TIGR03177] Flp pilus assembly protein CpaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000207923 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.378480000000001e-18 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAAAG GTGTATTTCT ACCGCTTGTT ATAGCTATTT TGGCGGCCGT GGTTTACTTT 
ATAATACTTT TCTCAAACCA GAGCAAGTTT GAAGAAAACA GCAAACTTGA AAGAGTTGTT
ATCGCTATCA GGGATTTGCC TGAAAGAAAA GTTATTACAA AAGGTGATTT GGGCGTTATT
GAAATGCCTA ATAAATTTTT GCAAAAGGAC GCTTTTACAG TTACAAGAGA TTCTGATATA
ACAAAATTGG AAAATAACCT TGTGACAAGA ATAGCTATTC CAAAAGGAAA CCAAGTCAGC
AAAGCGGCTT TAACCTCACT CAGTCCTGAA GCGGGTTTAA GCGCTAGGGT ATCTCCTTTA
TGGAGAGGTT TTGTTTTAAC CGATGTTCCG AGTTCCGTGG CTAACCTTAT TAAGCCGGAC
GATTGGGTTG ACGTGCTTTT AACTTTCGAC GCTTATATGA AGAACACCGG ACAGAAAGAA
AAAATTACCG CTACAATTTT ACAAAGAATT AAAGTGCTTG GCGTGGGTAA TGATTTGGGG
CAGGGTATGG ACGCTAACCA ACTCAGAGCT ACCAGAGAAA GAGAAGCAAG CGCTTCAGCT
TTTAACGACA GTTCCGCTAT CAGCTTGGCA TTACACCCCA GGGACGCGCA GTATTTGGCC
TTAGCTAAAG AAGAAGGCAT AATAACTCTT GTAGTAAGAA GACGTGAGGA CCAGGGCGTA
CATTCAATAG CAATAGCCAG TCTTACGGAA ATGTTTAAAT AA
 
Protein sequence
MKKGVFLPLV IAILAAVVYF IILFSNQSKF EENSKLERVV IAIRDLPERK VITKGDLGVI 
EMPNKFLQKD AFTVTRDSDI TKLENNLVTR IAIPKGNQVS KAALTSLSPE AGLSARVSPL
WRGFVLTDVP SSVANLIKPD DWVDVLLTFD AYMKNTGQKE KITATILQRI KVLGVGNDLG
QGMDANQLRA TREREASASA FNDSSAISLA LHPRDAQYLA LAKEEGIITL VVRRREDQGV
HSIAIASLTE MFK