Gene Emin_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0880 
Symbol 
ID6262690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp968987 
End bp970726 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content40% 
IMG OID642611359 
ProductABC transporter related 
Protein accessionYP_001875772 
Protein GI187251290 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000105658 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000323108 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTAAAA TTTTAAACGC CGCCACACAA GGGCAGGCAA AAAAAATGTT ACCCATGCTG 
GGGTGGACAG TATTGGAATA CGCTTTAAGA GGCGCGCCTT ACGCCGTTTT ACTTTTTGTA
GTTTACGAAC TTTTCAAACC GCTTGAAACG CCCGGCGCAA TTCTTAACAC GGCAGCTATA
ATGAAAGCAT GTATTATCCT TTTTATTATA ATCGTACTTT TATGCATTGT TAACACAAAG
TCTTTCTTTA GCGCGTATAA AGACGGTTAC ACAATTTGCG CGGGCGTGCG CCTTAAAATG
GCCGACCACT TAAGAAGACT GTCCATGGGT TTTTACAACG CAAAAGACCC CGGCGATATA
GGTGCATACC TTGTTAACGA TTACGCCAAC ATAGAACAGC TTGTAACGCA TCTTGTGCCG
CAGGTTGTAG GCGGAGTGAC AATGCCTTTA GTATTGCTTA TAAGTTTGGC GTTTTTTAAT
TTAAAACTTG CGCTGGCCGC GGGCGGCGTA ATTTTGCTTG CCTTGCCCGC TTTGCTGATA
TCTATAAAAA TATGCAGATT CGCGGGCAAA ATTCACCAGC AGACAAAAAC TTCCGCAGAT
TCACGCATGA TTGAGTATAT ACAAGGCATA AAATTTATTA AAGCCTTTAA TTTAGGCGGT
GATAAATTTG AAAGGCTTGA AAACGCTTTC AGAAAATTAA AAATAGACAG CATACGTTTA
GAAGGTGGCA GCGGCCCCAC TATTATATTA AGCTCGCTTG TATTAAATAC GGGTATAGTT
ATTATAATGC TTTACGGTTT TAAGCTGTTT ACAGCGGGCC AGCTGGAACT TTCTGTTTAT
CTGATGTTTT TAATTTTAGG CAGCCGTATA TACGAACCGC TTTTGCAGTC CCTTATTTTT
ATAGGATTGA TTACATATAT GAACCTTGGC GTTGAAAGAA TGGAAACACT CAGGAAAACA
CCCCCTATAA AGGAAGGTAA AAACAATGAA AAAATTAAAA ACTTTGATAT TGAGTTTGAG
GATATAACGT TTTCTTACCA TAACAAGCAG GTAATTAAAA ACCTAAGCGC TAAAATAAAC
TCACACGCTT TAACCGCTTT TGTGGGGCCT TCCGGCTCGG GCAAAACAAC TCTTACGCGC
CTTATAGCCC GCTTTTGGGA CGTTGACAGC GGCGCGGTTA AATTAAACGG CGTTAATATA
AAAGATTACA AACTTGATAA TCTGCTTTCT TGTATATCCA TGATATTTCA AGACGTGTAT
TTGTTTAAAG ACACAATATA CAACAATATA AAAATAGGTA AAGAGGACGC TACTGAAGAA
GAAATATTTG AAGCCGCCAA AAAAGCGCGC TGCCATGATT TTATAATGGC GCTTCCTAAC
CAGTATAACA CCTTGGTTGG GGAGGCCGGC TCCACTCTAT CCGGAGGGGA AAGACAGCGT
ATTTCCATAG CTAGAGCAAT ACTTAAAGAC GCCCCTATAA TTTTAATTGA TGAAGCCACC
GCTTTCCTTG ACCCGGAAAA CGAGCTTCAT ATACAACAGG CTATAAACGA TTTGGTAAAG
GATAAAACCG TTATCGTCAT AGCCCACAGG CTAAATACCA TAAGAGAGGC GGACAATATT
ATTGTTATTA ACAACGGTAA AGTTGAGCAG CAGGGCCGGC ACGACGATCT TCTTTCCCAA
GGCGGAATTT ACAAAAACTT GTGGGACGAA CAGCAGCTTA TAAAAAATTG GAAGTTTTAA
 
Protein sequence
MIKILNAATQ GQAKKMLPML GWTVLEYALR GAPYAVLLFV VYELFKPLET PGAILNTAAI 
MKACIILFII IVLLCIVNTK SFFSAYKDGY TICAGVRLKM ADHLRRLSMG FYNAKDPGDI
GAYLVNDYAN IEQLVTHLVP QVVGGVTMPL VLLISLAFFN LKLALAAGGV ILLALPALLI
SIKICRFAGK IHQQTKTSAD SRMIEYIQGI KFIKAFNLGG DKFERLENAF RKLKIDSIRL
EGGSGPTIIL SSLVLNTGIV IIMLYGFKLF TAGQLELSVY LMFLILGSRI YEPLLQSLIF
IGLITYMNLG VERMETLRKT PPIKEGKNNE KIKNFDIEFE DITFSYHNKQ VIKNLSAKIN
SHALTAFVGP SGSGKTTLTR LIARFWDVDS GAVKLNGVNI KDYKLDNLLS CISMIFQDVY
LFKDTIYNNI KIGKEDATEE EIFEAAKKAR CHDFIMALPN QYNTLVGEAG STLSGGERQR
ISIARAILKD APIILIDEAT AFLDPENELH IQQAINDLVK DKTVIVIAHR LNTIREADNI
IVINNGKVEQ QGRHDDLLSQ GGIYKNLWDE QQLIKNWKF