Gene Emin_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0171 
Symbol 
ID6263057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp185266 
End bp185688 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content38% 
IMG OID642610634 
ProductRDD domain-containing protein 
Protein accessionYP_001875072 
Protein GI187250590 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000652856 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0096302 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCATATT CAGCATTCTG GAGAAGGTTA GTGGCATATA TTATTGACGG TATAATCATA 
GGCTTAATAG ATACGATTAT CAGTTTTGTA TTAGGCTTTG TAGCCGCTAT TACAGGCTCA
CAGGCTCTTA TAACTATCGC TACGTTACTT TCATTAATAA TAGGATTAGC GGTATTTATA
GCCTATTTCG CTTATCAGGA AAGCTCGGAA GATCAGGCCA CTATAGGTAA AAAAGCTATG
GGCATTAAAG TTGTTGATAT GAACGGAAAC AGAATCCCCC TTAAAACAGC CGCAATAAGA
TCAGCTTCCA AGATTCTTTC CGCAGCCATT ATATACATAG GTTTTATTAT GGCCGCTTTT
ACGCAGCAAA AACAAGCTTT GCACGATATA ATAGCCAAAA CCCTTGTTAT TGACGCAAAA
TAA
 
Protein sequence
MAYSAFWRRL VAYIIDGIII GLIDTIISFV LGFVAAITGS QALITIATLL SLIIGLAVFI 
AYFAYQESSE DQATIGKKAM GIKVVDMNGN RIPLKTAAIR SASKILSAAI IYIGFIMAAF
TQQKQALHDI IAKTLVIDAK