Gene Emin_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0170 
Symbol 
ID6262840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp184806 
End bp185243 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content38% 
IMG OID642610633 
ProductRDD domain-containing protein 
Protein accessionYP_001875071 
Protein GI187250589 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000534855 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00967799 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACATACG CTGGATTTTG GAAAAGATTT TTAGCTTATA TAATTGACTA TTTTATTGTT 
TTTATAGCCA GTTTTATATG CGGGTTCATG ATAGGCATTT TATTAGGCAT ACTTATGGCT
GTTTTTAATA TTAACCCGCA AGAAGCCGAA GCGGCTCTAA GCTTTGCGGG CGCACTTGTC
GGATTGAGTA TATGGTTTTT ATACTTCGCA ATATTTGAAA GTTCAAAACT GCAGGCAACT
CCCGGCAAAT TATCAATTGG CATCAGAGTA ACAGGTCTTA ACGGGGAAAG AATAACTTTC
CTTCGCGCTT TAGGCAGAAC GGCTGCTAAA ATTATTTCCG TCATTATTTT GGCGATAGGA
TTTATCATGG CGGCTTTTAC ACAAAAAAAG CAGGCTTTGC ACGATATAAT AGCCCAAACG
CTTGTCATAA ACAAATAG
 
Protein sequence
MTYAGFWKRF LAYIIDYFIV FIASFICGFM IGILLGILMA VFNINPQEAE AALSFAGALV 
GLSIWFLYFA IFESSKLQAT PGKLSIGIRV TGLNGERITF LRALGRTAAK IISVIILAIG
FIMAAFTQKK QALHDIIAQT LVINK