Gene Emin_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0172 
Symbol 
ID6264028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp185768 
End bp186811 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content40% 
IMG OID642610635 
Producthypothetical protein 
Protein accessionYP_001875073 
Protein GI187250591 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000263309 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0370984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC ATATTGAACG AATTATTTCA AGCACAAAAG TCCTTCATTT TATATCAGTT 
TGCGTAGCTA TACTTGCCAG TGTGGCGCTT GCGTTTTGTC TGATTTTTAC CAAATCGGTT
TCCATGCCGT TTGTCATAGC GGTGCTTATT TATACGGTAT TAGCGCCTAT GATACGTTTC
TTAACAAAAA AAACAAAGAT GCCAAACCTT CTTATACTTT CGCTTACGTT TTTGGCTGTT
TGCGGCCTTA CCGCGCTGGT CGCAATATTT ATATATAACT CCATAGGCAG TTTTATAAGC
GGCGCGGACG CTTATAGAGA AAAACTTATC GATATAGCGA ATTGGGCGAC ATTTACCGCG
TCCAAATATA ATTTTCACAT AGACAACGCT TTTATTTTAG ACGCACTTAG AAACCTGCCC
GTATTTACGT TTGTTAAAAG CCTGGGCAGC GTACTGCTTT CTTTATCAAT TTCCACATTT
TTAGTTATTA TTATCTTATT CTTTTTCTTT GCCGGATCCC GCGCGGCGGA ACAAAAAACA
ACCAAAGAAA GTAAAACCAT GCAGGAAATA CAAAGTAGAA TTTCTTTTTA TATAACGGTT
AAAGTGGCCG TATCTTTAAT AACAGGTATC GTGGTTTGGA TAATATTGGG CGCGTTTAAC
GTTGAACTGG CTTTTATGTT CGGATTTATA ACTTTTTTTC TTAATTTTAT ACCCAATGTC
GGTTCAATAG TTGCGGTTCT GCTGCCGGTG CCCGTAATAT TTTTACAATA TGGATTGGGT
TCCAGATTTA TAATTATAAT GAGTTTAGCC ATAACAGCCC AGTTTGTGCT TGGTAACATT
ATTGAACCAA AAGTAATGGG CAGCGCCGTA GACATGCACC CGGTAACCGT TATATGCGCG
TTAGTGGTGT GGAGTTTAAT TTGGGGAATA GCCGGCGCAT TTCTGGCCGT TCCGCTGACA
GCAGCGATAC AGGTAGTTAT GGCAAGGTTT AAAACAACCG CGCCGCTGGC CGAACTCATG
GCGGGAAGAA TACCTTCCTT CTAG
 
Protein sequence
MSEHIERIIS STKVLHFISV CVAILASVAL AFCLIFTKSV SMPFVIAVLI YTVLAPMIRF 
LTKKTKMPNL LILSLTFLAV CGLTALVAIF IYNSIGSFIS GADAYREKLI DIANWATFTA
SKYNFHIDNA FILDALRNLP VFTFVKSLGS VLLSLSISTF LVIIILFFFF AGSRAAEQKT
TKESKTMQEI QSRISFYITV KVAVSLITGI VVWIILGAFN VELAFMFGFI TFFLNFIPNV
GSIVAVLLPV PVIFLQYGLG SRFIIIMSLA ITAQFVLGNI IEPKVMGSAV DMHPVTVICA
LVVWSLIWGI AGAFLAVPLT AAIQVVMARF KTTAPLAELM AGRIPSF