32 homologs were found in PanDaTox collection
for query gene VEA_003243 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013456  VEA_003243  type IV secretory pathway VirD2 component  100 
 
 		 443 aa  925    Vibrio sp. Ex25  Bacteria  normal  0.403709  n/a   
 
 
-
 
NC_013422  Hneap_0481  Relaxase/mobilization nuclease family protein  25.44 
 
 		 807 aa  65.9  0.000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011737  PCC7424_5445  Relaxase/mobilization nuclease family protein  21.7 
 
 		 306 aa  61.6  0.00000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.201668 
 
 
-
 
NC_014250  Aazo_5344  relaxase/mobilization nuclease family protein  24.07 
 
 		 279 aa  60.5  0.00000006  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2475  Relaxase/mobilization nuclease family protein  20.87 
 
 		 392 aa  58.2  0.0000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0661835 
 
 
-
 
NC_011729  PCC7424_3874  Relaxase/mobilization nuclease family protein  20.87 
 
 		 392 aa  57.4  0.0000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.991649 
 
 
-
 
NC_008347  Mmar10_2322  relaxase/mobilization nuclease family protein  23.65 
 
 		 303 aa  54.7  0.000003  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011723  PCC8801_4540  Relaxase/mobilization nuclease family protein  25.82 
 
 		 464 aa  55.1  0.000003  Cyanothece sp. PCC 8801  Bacteria  normal  1  normal  0.727703 
 
 
-
 
NC_011094  SeSA_A2898  relaxase/mobilization nuclease domain protein  26.82 
 
 		 413 aa  53.5  0.000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  decreased coverage  0.000982832 
 
 
-
 
NC_013422  Hneap_0361  Relaxase/mobilization nuclease family protein  24.51 
 
 		 804 aa  53.5  0.000008  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_4164  relaxase/mobilization nuclease family protein  24.5 
 
 		 458 aa  53.1  0.00001  Pseudomonas putida GB-1  Bacteria  normal  0.257908  normal  0.401641 
 
 
-
 
NC_009801  EcE24377A_2918  relaxase/mobilization nuclease domain-containing protein  25.71 
 
 		 404 aa  52  0.00002  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2943  Relaxase/mobilization nuclease family protein  24.37 
 
 		 386 aa  51.6  0.00003  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG0868  mobilization protein  21.76 
 
 		 307 aa  50.8  0.00004  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.024127 
 
 
-
 
NC_004632  PSPTO_B0036  relaxase/mobilization nuclease MobA, putative  27.83 
 
 		 651 aa  50.8  0.00004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.844727  n/a   
 
 
-
 
NC_004633  PSPTOA0029  relaxase/mobilization nuclease MobA, putative  27.83 
 
 		 650 aa  51.2  0.00004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0136618  n/a   
 
 
-
 
NC_013037  Dfer_5231  Relaxase/mobilization nuclease family protein  23.86 
 
 		 281 aa  50.8  0.00005  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.263601  normal  1 
 
 
-
 
NC_009441  Fjoh_3018  relaxase/mobilization nuclease family protein  25 
 
 		 426 aa  50.4  0.00006  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG1489  hypothetical protein  20.92 
 
 		 426 aa  50.1  0.00009  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.688317 
 
 
-
 
NC_004578  PSPTO_1093  relaxase/mobilization nuclease domain protein  29.57 
 
 		 805 aa  49.3  0.0001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.246621  n/a   
 
 
-
 
NC_009436  Ent638_2897  relaxase/mobilization nuclease family protein  22.54 
 
 		 402 aa  49.7  0.0001  Enterobacter sp. 638  Bacteria  normal  0.0597444  normal  0.476634 
 
 
-
 
NC_007973  Rmet_2839  hypothetical protein  31.17 
 
 		 208 aa  49.7  0.0001  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009788  EcE24377A_D0058  relaxase/mobilization nuclease domain-containing protein  31 
 
 		 899 aa  48.1  0.0003  Escherichia coli E24377A  Bacteria  normal  0.0607238  n/a   
 
 
-
 
NC_013421  Pecwa_1709  Relaxase/mobilization nuclease family protein  30.39 
 
 		 438 aa  46.2  0.001  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_3713  relaxase/mobilization nuclease family protein  29.03 
 
 		 431 aa  45.1  0.003  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008762  Pnap_4982  relaxase/mobilization nuclease family protein  36.23 
 
 		 843 aa  44.3  0.004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.154729  n/a   
 
 
-
 
NC_013731  Slin_6701  Relaxase/mobilization nuclease family protein  26.53 
 
 		 440 aa  44.3  0.005  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.201149 
 
 
-
 
NC_007515  Gmet_A3574  relaxase/mobilization nuclease domain-containing protein  29.67 
 
 		 743 aa  43.9  0.006  Geobacter metallireducens GS-15  Bacteria  normal  1  n/a   
 
 
-
 
NC_007615  Nmul_B2797  relaxase/mobilization nuclease domain-containing protein  34.43 
 
 		 398 aa  43.9  0.006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.276128  n/a   
 
 
-
 
NC_012917  PC1_1610  Relaxase/mobilization nuclease family protein  29.41 
 
 		 444 aa  43.5  0.008  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.589746  n/a   
 
 
-
 
NC_009704  YpsIP31758_A0026  conjugal transfer relaxase TraI  24.19 
 
 		 873 aa  43.5  0.008  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000771366  n/a   
 
 
-
 
NC_011081  SeHA_A0074  putative relaxase/mobilization nuclease domain protein  29 
 
 		 899 aa  43.1  0.01  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.0174778 
 
 
-
 
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