27 homologs were found in PanDaTox collection
for query gene PC1_1610 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_1610  Relaxase/mobilization nuclease family protein  100 
 
 		 444 aa  919    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.589746  n/a   
 
 
-
 
NC_013421  Pecwa_1709  Relaxase/mobilization nuclease family protein  70.07 
 
 		 438 aa  608  1e-173  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_2897  relaxase/mobilization nuclease family protein  56.14 
 
 		 402 aa  335  1e-90  Enterobacter sp. 638  Bacteria  normal  0.0597444  normal  0.476634 
 
 
-
 
NC_009801  EcE24377A_2918  relaxase/mobilization nuclease domain-containing protein  56.74 
 
 		 404 aa  328  1.0000000000000001e-88  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
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NC_012880  Dd703_2943  Relaxase/mobilization nuclease family protein  56.46 
 
 		 386 aa  327  2.0000000000000001e-88  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A2898  relaxase/mobilization nuclease domain protein  56.29 
 
 		 413 aa  324  2e-87  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  decreased coverage  0.000982832 
 
 
-
 
NC_013422  Hneap_0361  Relaxase/mobilization nuclease family protein  33.68 
 
 		 804 aa  157  3e-37  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0481  Relaxase/mobilization nuclease family protein  32.99 
 
 		 807 aa  156  5.0000000000000005e-37  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014250  Aazo_5344  relaxase/mobilization nuclease family protein  31.6 
 
 		 279 aa  142  9.999999999999999e-33  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2475  Relaxase/mobilization nuclease family protein  31.69 
 
 		 392 aa  135  9.999999999999999e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0661835 
 
 
-
 
NC_011729  PCC7424_3874  Relaxase/mobilization nuclease family protein  31.69 
 
 		 392 aa  135  1.9999999999999998e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.991649 
 
 
-
 
NC_007973  Rmet_2839  hypothetical protein  36.6 
 
 		 208 aa  109  1e-22  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013735  Slin_7038  Relaxase/mobilization nuclease family protein  24.73 
 
 		 490 aa  80.1  0.00000000000007  Spirosoma linguale DSM 74  Bacteria  normal  1  n/a   
 
 
-
 
NC_011737  PCC7424_5445  Relaxase/mobilization nuclease family protein  24.54 
 
 		 306 aa  75.1  0.000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.201668 
 
 
-
 
NC_007412  Ava_C0180  hypothetical protein  22.97 
 
 		 484 aa  73.6  0.000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.0133176 
 
 
-
 
NC_002950  PG0868  mobilization protein  25.09 
 
 		 307 aa  71.2  0.00000000004  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.024127 
 
 
-
 
NC_011723  PCC8801_4540  Relaxase/mobilization nuclease family protein  25.34 
 
 		 464 aa  67.8  0.0000000004  Cyanothece sp. PCC 8801  Bacteria  normal  1  normal  0.727703 
 
 
-
 
NC_010322  PputGB1_4164  relaxase/mobilization nuclease family protein  22.73 
 
 		 458 aa  60.5  0.00000006  Pseudomonas putida GB-1  Bacteria  normal  0.257908  normal  0.401641 
 
 
-
 
NC_002950  PG1489  hypothetical protein  41.3 
 
 		 426 aa  57.4  0.0000006  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.688317 
 
 
-
 
NC_007973  Rmet_2834  hypothetical protein  41.38 
 
 		 441 aa  56.6  0.0000008  Cupriavidus metallidurans CH34  Bacteria  normal  0.705285  normal  1 
 
 
-
 
NC_013037  Dfer_5231  Relaxase/mobilization nuclease family protein  23.56 
 
 		 281 aa  56.2  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.263601  normal  1 
 
 
-
 
NC_013734  Slin_7019  Relaxase/mobilization nuclease family protein  22.53 
 
 		 294 aa  55.5  0.000002  Spirosoma linguale DSM 74  Bacteria  normal  0.170359  n/a   
 
 
-
 
NC_008538  Arth_4335  relaxase/mobilization nuclease family protein  26.35 
 
 		 519 aa  51.6  0.00003  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013738  Slin_7068  Relaxase/mobilization nuclease family protein  21.32 
 
 		 315 aa  51.2  0.00003  Spirosoma linguale DSM 74  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_0321  hypothetical protein  28.68 
 
 		 510 aa  47  0.0007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_3761  relaxase/mobilization nuclease family protein  24.81 
 
 		 421 aa  43.5  0.007  Flavobacterium johnsoniae UW101  Bacteria  normal  0.751124  n/a   
 
 
-
 
NC_013456  VEA_003243  type IV secretory pathway VirD2 component  29.41 
 
 		 443 aa  43.1  0.01  Vibrio sp. Ex25  Bacteria  normal  0.403709  n/a   
 
 
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