Gene Dfer_5231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5231 
Symbol 
ID8228842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6308421 
End bp6309266 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content44% 
IMG OID644933081 
ProductRelaxase/mobilization nuclease family protein 
Protein accessionYP_003089594 
Protein GI255038973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.263601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAA AAGTCGGACT GGGTAATTTC GCGAAAGGAA TATTGAGCTA TTGCTACTAC 
GAAAAAGAAT TGTCGGCAAA GCAAGCGAAG CAAATGACGC TCGACGATGT TCGGGGAGAG
CTCATCTATA TCCAGCATCT TGGCATCAGC ACGTTGAAGG ACGGCAGACT GGATTTGGAT
TACCTGGCAA AACAGATGCT GGACAATAGG GACAAGAACA GAAACCTTAA TAAATATGTA
TGGCATCAGT CATTCAGCTT TCCACCGGGC GAAGATCCGC CCGAAGAGAA GTTGACTACG
CTCGCGCAAG AGTTTGCAAA GGAATTTGGT TTCACAGAAA ATCAAATGCT TGTATTCCGG
CACAACGACA CGAAACACAA GCATATCCAT ATCGTGGCCA ACCGTATAAA CTACAATGGC
AAAAACACTG CTGACCATTT CAAAAACTAT GCACGAACGG GTGAGTTTTC AAGAAGAATG
GAAATGGAGC TCGGGCTGAC CATAACTCCC GACATGAGCC TGAATCAGAA CGTAAAACAG
CAAGTCCCGA CACAAGACAC TGCGATCATT AAACTAAGAA ATCTAGTCGA CCAAACGCTG
GCAAAGGTAT CCGCATTTGA CGACTTCGCT AACCAAATGC TCGCTCATGG TTTCAAAACG
TATAGAGGGA GAGGTGTAGC TTTTTTCAAT ATGCAGAATC GGATGAAAGT GAAAGGTTCT
GACCTGGGTA AAGACTATTC ATTGCAAAAT CTCGAAAAGC GAATGGGTAT GGGGATGCCG
CAAGCTTTAT TACCTATTAA AAAGAAGAAA AAGTCTCGCA GGAAGCAACA GGGATTAGGT
ATGTAA
 
Protein sequence
MIGKVGLGNF AKGILSYCYY EKELSAKQAK QMTLDDVRGE LIYIQHLGIS TLKDGRLDLD 
YLAKQMLDNR DKNRNLNKYV WHQSFSFPPG EDPPEEKLTT LAQEFAKEFG FTENQMLVFR
HNDTKHKHIH IVANRINYNG KNTADHFKNY ARTGEFSRRM EMELGLTITP DMSLNQNVKQ
QVPTQDTAII KLRNLVDQTL AKVSAFDDFA NQMLAHGFKT YRGRGVAFFN MQNRMKVKGS
DLGKDYSLQN LEKRMGMGMP QALLPIKKKK KSRRKQQGLG M