Gene Slin_6701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6701 
Symbol 
ID8715967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp62591 
End bp63913 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content44% 
IMG OID 
ProductRelaxase/mobilization nuclease family protein 
Protein accessionYP_003391456 
Protein GI284005636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.201149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATAC GAATCTTAAC CGGAAAAGAT GTCGCGGGAG CAGTCCGCTA CAATGAGCAG 
AAAGTAGAAC AGGGACAGGC TGAACGTATC CAAATAGCCA ATTATCCTAG TAATGAGATA
GCCCAGAAAT ACCCTCAATT AAGGCTTCAA TTACTCGAAC AATACGCTCG TCTAAACCCC
GGAATTCAAA AGCCATCAGT GCATTTAGCG ATCGCCTTTC ATCCAACGGA GGTACTGAGG
GCCGATCAGT TGAAAGTGAT AGGAGAGAAG GTGATGACCG AAATAGGTTT TGGAAAACAA
CCTTACCTGA TGTACCAGCA CCATGATACC CAACATCCCC ATATCCATAT AGTATCCGTA
GCGGTGGATG CAAATGGGAA TAAAATCAGT GACAAATTCA TCAAGAACCG GTTGCAAAAA
ATACGCCGTC GACTTGAAAC GAGTTTCGAG TTAGTGCAAG CCGAACGCAC AACGCTGTCT
CAAGAGCCAC GTAGGGTAGG AGAGGGGGCA GGGGTTGATC TACAATCAAC CAAGCAGACA
GTTGCCGATA AGGTGAAGAG GATATTGGAA ACGTATTCCT TTGGATCTGT GAATAGCTTC
AAGAAGTATT TGGAGAGTGA AGGCATCACA TTGAATACCA AAGCAGGGCG TAGTCAATCA
GGAATAACAT ACCAGCATGT TAACCCTGAG GGAGCTAACA ATCGACCTAT AAAAGCAAGT
GGTTTGCCAA GCCGACCAAC ACATGCTAGG TTGACAGATC TTTTCTCAAA TCAGGCAGAT
CGACACAAAA GAGAGTGCAA AACAGTAGAA ACCCTGCTTC AAAAGCGACT TGCTGCTTAC
CGAACCTTGA CCGAACATGA CTACAAACAG TCTTTGCGCC AAGTTGGCAT CAAGGTACAA
GAAACGGAGG GGGCTTACCT CTACGTAAAT AGCCGGGCCA AGGTGGTTGT ATACGAAACC
GAGTTAGACA AGGACTATAC CAGACAAGAG TTATTGAAAC GCTTCTCCCA AATGACAGAG
CGGGAACCAA TAGAAAAGCT GGACTTATTA AGCCAAAAAA GTCAAAGAGC TGACGTTCAA
AAACAAACCA AACTAAACGA TATAGGTGCT CGGAAACGGC CGGTAAGTAG GGTGGAGGGA
TTAGAAATAG CCTCAACTGA GAAGATGGGG GTTAAGGAAG ATGCCGAAAA GAAAACGAAT
ACATCCAAAG TGATGGATCA GACTGTGGGA CTGATAGAAA AGCCGATAGA AGAGGAGCTA
GTTCAAGGTC AAATGAAGAA AAATCAGAAA AAAAATAAGC AGCGAAAGAT ACGTCGTATG
TAA
 
Protein sequence
MVIRILTGKD VAGAVRYNEQ KVEQGQAERI QIANYPSNEI AQKYPQLRLQ LLEQYARLNP 
GIQKPSVHLA IAFHPTEVLR ADQLKVIGEK VMTEIGFGKQ PYLMYQHHDT QHPHIHIVSV
AVDANGNKIS DKFIKNRLQK IRRRLETSFE LVQAERTTLS QEPRRVGEGA GVDLQSTKQT
VADKVKRILE TYSFGSVNSF KKYLESEGIT LNTKAGRSQS GITYQHVNPE GANNRPIKAS
GLPSRPTHAR LTDLFSNQAD RHKRECKTVE TLLQKRLAAY RTLTEHDYKQ SLRQVGIKVQ
ETEGAYLYVN SRAKVVVYET ELDKDYTRQE LLKRFSQMTE REPIEKLDLL SQKSQRADVQ
KQTKLNDIGA RKRPVSRVEG LEIASTEKMG VKEDAEKKTN TSKVMDQTVG LIEKPIEEEL
VQGQMKKNQK KNKQRKIRRM