28 homologs were found in PanDaTox collection
for query gene EcE24377A_2918 on replicon NC_009801
Organism: Escherichia coli E24377A



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009801  EcE24377A_2918  relaxase/mobilization nuclease domain-containing protein  100 
 
 
404 aa  837    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2898  relaxase/mobilization nuclease domain protein  65.2 
 
 
413 aa  516  1.0000000000000001e-145  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  decreased coverage  0.000982832 
 
 
-
 
NC_009436  Ent638_2897  relaxase/mobilization nuclease family protein  51.36 
 
 
402 aa  382  1e-105  Enterobacter sp. 638  Bacteria  normal  0.0597444  normal  0.476634 
 
 
-
 
NC_012880  Dd703_2943  Relaxase/mobilization nuclease family protein  51.41 
 
 
386 aa  381  1e-104  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1610  Relaxase/mobilization nuclease family protein  55.67 
 
 
444 aa  326  5e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.589746  n/a   
 
 
-
 
NC_013421  Pecwa_1709  Relaxase/mobilization nuclease family protein  54.7 
 
 
438 aa  319  5e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0481  Relaxase/mobilization nuclease family protein  37.65 
 
 
807 aa  174  1.9999999999999998e-42  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0361  Relaxase/mobilization nuclease family protein  37.65 
 
 
804 aa  164  2.0000000000000002e-39  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3874  Relaxase/mobilization nuclease family protein  31.61 
 
 
392 aa  142  8e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.991649 
 
 
-
 
NC_011729  PCC7424_2475  Relaxase/mobilization nuclease family protein  31.61 
 
 
392 aa  141  1.9999999999999998e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0661835 
 
 
-
 
NC_014250  Aazo_5344  relaxase/mobilization nuclease family protein  30.63 
 
 
279 aa  129  1.0000000000000001e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2839  hypothetical protein  32.12 
 
 
208 aa  104  2e-21  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013735  Slin_7038  Relaxase/mobilization nuclease family protein  25.81 
 
 
490 aa  82  0.00000000000002  Spirosoma linguale DSM 74  Bacteria  normal  n/a   
 
 
-
 
NC_011737  PCC7424_5445  Relaxase/mobilization nuclease family protein  26.45 
 
 
306 aa  81.3  0.00000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.201668 
 
 
-
 
NC_011723  PCC8801_4540  Relaxase/mobilization nuclease family protein  29.02 
 
 
464 aa  76.6  0.0000000000006  Cyanothece sp. PCC 8801  Bacteria  normal  normal  0.727703 
 
 
-
 
NC_002950  PG0868  mobilization protein  25.28 
 
 
307 aa  69.7  0.00000000009  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.024127 
 
 
-
 
NC_013947  Snas_0321  hypothetical protein  26.69 
 
 
510 aa  65.1  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013738  Slin_7068  Relaxase/mobilization nuclease family protein  27.09 
 
 
315 aa  64.7  0.000000003  Spirosoma linguale DSM 74  Bacteria  n/a    n/a   
 
 
-
 
NC_007412  Ava_C0180  hypothetical protein  22.54 
 
 
484 aa  61.2  0.00000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0133176 
 
 
-
 
NC_008538  Arth_4335  relaxase/mobilization nuclease family protein  26.67 
 
 
519 aa  60.8  0.00000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2834  hypothetical protein  40 
 
 
441 aa  57  0.0000006  Cupriavidus metallidurans CH34  Bacteria  normal  0.705285  normal 
 
 
-
 
NC_013037  Dfer_5231  Relaxase/mobilization nuclease family protein  26.44 
 
 
281 aa  55.8  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.263601  normal 
 
 
-
 
NC_010322  PputGB1_4164  relaxase/mobilization nuclease family protein  22.16 
 
 
458 aa  52.8  0.00001  Pseudomonas putida GB-1  Bacteria  normal  0.257908  normal  0.401641 
 
 
-
 
NC_013456  VEA_003243  type IV secretory pathway VirD2 component  25.71 
 
 
443 aa  52  0.00002  Vibrio sp. Ex25  Bacteria  normal  0.403709  n/a   
 
 
-
 
NC_009441  Fjoh_3713  relaxase/mobilization nuclease family protein  27.92 
 
 
431 aa  47  0.0006  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013734  Slin_7019  Relaxase/mobilization nuclease family protein  26.14 
 
 
294 aa  46.6  0.0009  Spirosoma linguale DSM 74  Bacteria  normal  0.170359  n/a   
 
 
-
 
NC_002950  PG1489  hypothetical protein  34.31 
 
 
426 aa  46.2  0.0009  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.688317 
 
 
-
 
NC_013731  Slin_6701  Relaxase/mobilization nuclease family protein  25.97 
 
 
440 aa  45.1  0.002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.201149 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>