Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0036 |
Symbol | |
ID | 1187414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 28470 |
End bp | 30425 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637408298 |
Product | relaxase/mobilization nuclease MobA, putative |
Protein accession | NP_808624 |
Protein GI | 29171578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.844727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTCA TCATCCCCCC GAAACGCGGC GATAAGGGCT CCAGCTTTAA CCGGCTGGTG AGCTATATCA GCGACCGTGG TGACAAGCCC AAAGATGATG ATCTAGTCAG CGCTGCGCCT CGCCAGAATG CTTCGCGCAC CAAGAAGGCG ATGTTTGATC GGCTTGTCGA TTATGCGGAT CGAAATGATG GAGACGACCG TGCCGTCGTG ATCACCGACG TGTTCCCCGA TGGCCGTCAG CGCTTGATCA GTGGGGGCAT TTCTTGCGAG ACAAACTGCT TCTCCTGGGA GACATCGGCC GCGGAAATGA ACATGGTTGC CGCCCAAAGT CGTCGCTGCC AGGACCCGGT CTATCACTTC ATCTTGTCGT GGCGCGAAAA CGAACTGCCT ACTGATGCGC AGATATTCGA ATGCGCCGAA CACTGCATTC GTCAGCTGGG CATGGAAGGG CATCAGTACG TCACCGCTAT TCACCAAGAC ACAGACAATA CGCACTGTCA TGTGGCGGTG AACCGAGTCA ATCCCATTAC CTACAAAGCC GCCGCCTTGT GGAATGATGC TGACACTTTG CAGAAAAGCT GCCGCGTTCT CGAACGCAAA TACGGATTCA TTCAGGATAA TGGAAGCTGG CAGTGGGGCG TCAACGACCA ATTGGTCCGC GCACCTTTCC GATATGGCAG CGCTCCGCAA GGTACTGTGC CATTGCAGGT CTATTCAAAC ACCGAGAGTC TCTATCATTA CGCCGTGCGT GAGGTGCGCG AAAAGATATC TGAGCTTATC GAATCGCGAG AGATTGCCTG GCGTCAAATC CATCTGGCCC TACATGAACG TGGCTTGGGA TTGAGGGAGC AAGGCGAAGG TTTGGTGATC TATGATTTCC TGCGCCCCGA GGGTCCTGTG GTCAAGGCTT CTTCGGTTCA TCCGACGCTG ACCAAGTTTC GACTGGAAGC CCACATAGGT GCGTTTGAAG GGCCCCCCAC CTTCGAACAT GAAGAGTGGA GCTATGGTAT TTTTTCCTCT TACCAGCCTG AATTTGAACT CCGAGATAAA GACGTGCGTT TCGATCGCCG GCAGGCGAGA GCTGAGGCTC GGCTGGACTT AAAAATGCGC TACAAACGCT ATCGTGAAGG ATGGGAAAAA CCTGATCTTC ATGTCAAGGA TCGATACCAG CAAGTGGCTG CTCGGTACCA GGCAATGAAG GCGGACGTCA AACGCTCTCA GCACGATCCT TTGCTTCGCA AGTTGCTGTA TCGAGTTGCC GAGTTCGACC GGATGAAAGC CATGGCTGAG TTGCGCATCG AGCTTCGTGA CGAGCGGCAA GCGCTTGCCG AAAAGGGCTT GCTTCGTCCG CTTGCATACC GTCCCTGGGT CGAGCAGCAA GCTCTTAGAG GAGACGTTGC GGCTGTCAGT CAACTGCGTG GTTTTGTATA TCGAGAAAAG CGTAAGGGGC GCACTCCGGA TGGTGGTCTT GATCGTCTGA TCCAGTGCGG CCAGGCAGAT GACTCTGCTG TCTATCACCT GCGCTCTTAC ACGTCACATT TGCATCGTGA CGGCACTGTC GAATATTTGC GCGATGGCAG GGCGGGTGTG ATCGACCGTG GCGATTTCGT CCACGTAAAA CCGGGGTTCA ATGACGACGA TGAGCTGGAC AACTATCGGC TGGCCGCCAA CCTGGTATCT ACGAAAAGCG GTGACGCTGT GAGGATCATT GGTGATGACC AGTTCGTTGA CCAAGTGCTT GATGCGGGAT GTGGCGTCAA CCATCGCGGA AGTCAGTATG TGTTCCAGGT GACCGATCCA GAGCAGATGG CGCGCTATGA CGTGATCGAG AAGGATCACC GTCAGTATTA CGGCTACGAC GAGCCGGAGG TGAGTACCCA TTCCCCAGCT CGGCATGACC CGATGGATGA CGTCCCCGAT GATGATTACC AGCCTCCAAA GCCGTTCGTT GGTTGA
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Protein sequence | MNVIIPPKRG DKGSSFNRLV SYISDRGDKP KDDDLVSAAP RQNASRTKKA MFDRLVDYAD RNDGDDRAVV ITDVFPDGRQ RLISGGISCE TNCFSWETSA AEMNMVAAQS RRCQDPVYHF ILSWRENELP TDAQIFECAE HCIRQLGMEG HQYVTAIHQD TDNTHCHVAV NRVNPITYKA AALWNDADTL QKSCRVLERK YGFIQDNGSW QWGVNDQLVR APFRYGSAPQ GTVPLQVYSN TESLYHYAVR EVREKISELI ESREIAWRQI HLALHERGLG LREQGEGLVI YDFLRPEGPV VKASSVHPTL TKFRLEAHIG AFEGPPTFEH EEWSYGIFSS YQPEFELRDK DVRFDRRQAR AEARLDLKMR YKRYREGWEK PDLHVKDRYQ QVAARYQAMK ADVKRSQHDP LLRKLLYRVA EFDRMKAMAE LRIELRDERQ ALAEKGLLRP LAYRPWVEQQ ALRGDVAAVS QLRGFVYREK RKGRTPDGGL DRLIQCGQAD DSAVYHLRSY TSHLHRDGTV EYLRDGRAGV IDRGDFVHVK PGFNDDDELD NYRLAANLVS TKSGDAVRII GDDQFVDQVL DAGCGVNHRG SQYVFQVTDP EQMARYDVIE KDHRQYYGYD EPEVSTHSPA RHDPMDDVPD DDYQPPKPFV G
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