Gene PSPTOA0029 details

Gene Information

• Locus tag: PSPTOA0029
• ID: 1187378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004633
• Strand: +
• Start bp: 27739
• End bp: 29691
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637408362
• Product: relaxase/mobilization nuclease MobA, putative
• Protein accession: NP_808687
• Protein GI: 29171503

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.0136618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGTCA TCATCCCCCC GAAACGCGGC GATAAGGGCT CCAGCTTTAA CCGGCTGGTG 
AGCTATATCA GCGACCGTGG TGACAAGCCC AAAGATGATG ATCTAGTCAG CGCTGCGCCT 
CGCCAGAATG CTTCGCGCAC CAAGAAGGCG ATGTTTGATC GGCTTGTCGA TTATGCGGAT 
CGAAATGATG GAGACGACCG TGCCGTCGTG ATCACCGACG TGTTCCCCGA TGGCCGTCAG 
CGCTTGATCA GTGGGGGCAT TTCTTGCGAG ACAAACTGCT TCTCCTGGGA GACATCGGCC 
GCGGAAATGA ACATGGTTGC CGCCCAAAGT CGTCGCTGCC AGGACCCGGT CTATCACTTC 
ATCTTGTCGT GGCGCGAAAA CGAACTGCCT ACTGATGCGC AGATATTCGA ATGCGCCGAA 
CACTGCATTC GTCAGCTGGG CATGGAAGGG CATCAGTACG TCACCGCTAT TCACCAAGAC 
ACAGACAATA CGCACTGTCA TGTGGCGGTG AACCGAGTCA ATCCCATTAC CTACAAAGCC 
GCCGCCTTGT GGAATGATGC TGACACGTTG CAGAAAAGCT GCCGAGTCCT CGAACGCAAA 
TACGGATTCA TTCAGGACAA TGGGAGTTGG CAGTGGGGTG TCAACGACCA ATTGGTCCGT 
GCTCCTTTTC GGTATGGCAG TGCTCCGCAA GGGACTGTGC CATTGCAGGT CTATTCAAAC 
ACCGAGAGTC TCTATCATTA CGCCGTGCGT GAGGTGCGCG AAAAGATATC TGAGCTTATC 
GAATCGCGAG AGATTACCTG GCGTCAAATC CATCTGGCCC TGCATGAACG TGGCTTGGGA 
TTGAGGGAGC AAGGCGAAGG TTTGGTGATC TATGATTTCT TGCGCCCCGA GGGTCCTGTG 
GTCAAGGCTT CTTCGGTTCA TCCGACGCTG ACCAAGTTTC GATTGGAGGC CCACATAGGC 
CCGTTTGAAG GACCACCCAC CTTCGAACAT GAAGAATGGA GCTATGGTAT TTCTTCCTAT 
TACCAGCCTG CATTTGAACT CCGAGATAAA GACGTGCGTT TCGATCGCCG GCAGGCGAGA 
GCTGAGGCTC GGCTGGACTT AAAAATGCGC TACAAACGCT ATCGTGAGGG ATGGGAAAAA 
CCTGATCTTC ATGTCAAGGA TCGATACCAG CAAGTGGCTG CTCGCTACCA GGCAATGAAG 
GCGGACGTCA AACGCTCTCA GCACGATCCT TTGCTTCGCA AGTTGCTGTA TCGAGTTGCC 
GAGTTCGACC GGATGAAAGC CATGGCTGAG TTGCGCATCG AGCTTCGTGA TGAGCGGCAA 
GCGCTTGCCG AAAAGGGCTT GCTTCGTCCG CTTGCATACC GTCCCTGGGT CGAGCAGCAA 
GCTCTCAGAG GGGACGTTGC GGCGGTCAGT CAACTGCGTG GATTTGTGTA TCGAGAAAAG 
CGGAAGGAGC GCACTCCGGA CGGTGGGTTT GATCGTCTTA TCCAGTGCGG CCAGGCAGAT 
GATTCTGCTG TCTATCACCT GCGCTCTTAC ACGTCACATT TGCATCGTGA CGGCACTGTC 
GAATATCTGC GCGATGGCAG GGCGGGTGTG ATCGACCGTG GCGATTTCGT CCACGTAAAA 
CCGGGGTTCA ATGACGACGA TGAGTTGGAC AATTATCGGC TGGCCGCCAA CCTGGTATCC 
ACGAAAAGCG GTGACGCTGT GAGGATCATT GGTGATGACC AGTTCGTAGA CCAGGTGCTT 
GATGCGGGAT GTGGCGTCAA CCATCGCGGA AGTCAGTATG TGTTCCAAGT GACCGATCCA 
GAACAGTTGG CGCGCTACGA CGTGATCGAG AGGGATCACC GTCAGTATTA CGGATACGAC 
GAGCCGTCCC GTCCCCAGTC CCCCGTACGT CATGATCCGG TGGATGATGC TCCGGATGAT 
GGTTACCAGC CTCCAAGACC ATTTGGCGGT TGA 

 

Protein sequence

MNVIIPPKRG DKGSSFNRLV SYISDRGDKP KDDDLVSAAP RQNASRTKKA MFDRLVDYAD 
RNDGDDRAVV ITDVFPDGRQ RLISGGISCE TNCFSWETSA AEMNMVAAQS RRCQDPVYHF 
ILSWRENELP TDAQIFECAE HCIRQLGMEG HQYVTAIHQD TDNTHCHVAV NRVNPITYKA 
AALWNDADTL QKSCRVLERK YGFIQDNGSW QWGVNDQLVR APFRYGSAPQ GTVPLQVYSN 
TESLYHYAVR EVREKISELI ESREITWRQI HLALHERGLG LREQGEGLVI YDFLRPEGPV 
VKASSVHPTL TKFRLEAHIG PFEGPPTFEH EEWSYGISSY YQPAFELRDK DVRFDRRQAR 
AEARLDLKMR YKRYREGWEK PDLHVKDRYQ QVAARYQAMK ADVKRSQHDP LLRKLLYRVA 
EFDRMKAMAE LRIELRDERQ ALAEKGLLRP LAYRPWVEQQ ALRGDVAAVS QLRGFVYREK 
RKERTPDGGF DRLIQCGQAD DSAVYHLRSY TSHLHRDGTV EYLRDGRAGV IDRGDFVHVK 
PGFNDDDELD NYRLAANLVS TKSGDAVRII GDDQFVDQVL DAGCGVNHRG SQYVFQVTDP 
EQLARYDVIE RDHRQYYGYD EPSRPQSPVR HDPVDDAPDD GYQPPRPFGG