29 homologs were found in PanDaTox collection
for query gene PputGB1_4164 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_4164  relaxase/mobilization nuclease family protein  100 
 
 		 458 aa  962    Pseudomonas putida GB-1  Bacteria  normal  0.257908  normal  0.401641 
 
 
-
 
NC_011729  PCC7424_2475  Relaxase/mobilization nuclease family protein  25.5 
 
 		 392 aa  77.8  0.0000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0661835 
 
 
-
 
NC_011729  PCC7424_3874  Relaxase/mobilization nuclease family protein  25.5 
 
 		 392 aa  76.6  0.0000000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.991649 
 
 
-
 
NC_014250  Aazo_5344  relaxase/mobilization nuclease family protein  25.33 
 
 		 279 aa  73.9  0.000000000005  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_0321  hypothetical protein  26.86 
 
 		 510 aa  70.5  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_2839  hypothetical protein  30.59 
 
 		 208 aa  67.8  0.0000000004  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013422  Hneap_0481  Relaxase/mobilization nuclease family protein  28 
 
 		 807 aa  65.1  0.000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1709  Relaxase/mobilization nuclease family protein  22.82 
 
 		 438 aa  63.9  0.000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0361  Relaxase/mobilization nuclease family protein  25.89 
 
 		 804 aa  60.8  0.00000004  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011881  Achl_4629  Relaxase/mobilization nuclease family protein  26.48 
 
 		 545 aa  60.5  0.00000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008539  Arth_4225  relaxase/mobilization nuclease family protein  25 
 
 		 538 aa  59.7  0.0000001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013734  Slin_7019  Relaxase/mobilization nuclease family protein  27.45 
 
 		 294 aa  59.3  0.0000001  Spirosoma linguale DSM 74  Bacteria  normal  0.170359  n/a   
 
 
-
 
NC_012917  PC1_1610  Relaxase/mobilization nuclease family protein  21.77 
 
 		 444 aa  59.3  0.0000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.589746  n/a   
 
 
-
 
NC_007412  Ava_C0180  hypothetical protein  23.83 
 
 		 484 aa  57.4  0.0000005  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.0133176 
 
 
-
 
NC_008537  Arth_4407  relaxase/mobilization nuclease family protein  24.3 
 
 		 546 aa  56.6  0.0000008  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_3713  relaxase/mobilization nuclease family protein  31.15 
 
 		 431 aa  55.5  0.000002  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_6240  Relaxase/mobilization nuclease family protein  23.42 
 
 		 514 aa  54.7  0.000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009801  EcE24377A_2918  relaxase/mobilization nuclease domain-containing protein  22.16 
 
 		 404 aa  52.8  0.00001  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003243  type IV secretory pathway VirD2 component  24.5 
 
 		 443 aa  53.1  0.00001  Vibrio sp. Ex25  Bacteria  normal  0.403709  n/a   
 
 
-
 
NC_013037  Dfer_5231  Relaxase/mobilization nuclease family protein  28.57 
 
 		 281 aa  52  0.00002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.263601  normal  1 
 
 
-
 
NC_011081  SeHA_A0074  putative relaxase/mobilization nuclease domain protein  25.13 
 
 		 899 aa  50.1  0.00009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.0174778 
 
 
-
 
NC_010579  XfasM23_2249  conjugal transfer relaxase TraI  28.32 
 
 		 830 aa  49.7  0.0001  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_009788  EcE24377A_D0058  relaxase/mobilization nuclease domain-containing protein  25.13 
 
 		 899 aa  49.3  0.0001  Escherichia coli E24377A  Bacteria  normal  0.0607238  n/a   
 
 
-
 
NC_013735  Slin_7038  Relaxase/mobilization nuclease family protein  22.93 
 
 		 490 aa  49.3  0.0001  Spirosoma linguale DSM 74  Bacteria  normal  1  n/a   
 
 
-
 
NC_013738  Slin_7068  Relaxase/mobilization nuclease family protein  21.21 
 
 		 315 aa  48.5  0.0003  Spirosoma linguale DSM 74  Bacteria  n/a    n/a   
 
 
-
 
NC_011737  PCC7424_5445  Relaxase/mobilization nuclease family protein  33 
 
 		 306 aa  46.6  0.0009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.201668 
 
 
-
 
NC_009436  Ent638_2897  relaxase/mobilization nuclease family protein  23.19 
 
 		 402 aa  46.2  0.001  Enterobacter sp. 638  Bacteria  normal  0.0597444  normal  0.476634 
 
 
-
 
NC_009441  Fjoh_3018  relaxase/mobilization nuclease family protein  31.58 
 
 		 426 aa  44.7  0.003  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG1489  hypothetical protein  24.43 
 
 		 426 aa  44.3  0.004  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.688317 
 
 
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