More than 300 homologs were found in PanDaTox collection
for query gene RPB_2330 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_2330  metal dependent phosphohydrolase  100 
 
 
466 aa  952    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.541081  normal  0.158055 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  63.18 
 
 
365 aa  311  2e-83  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  63.6 
 
 
384 aa  310  2.9999999999999997e-83  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  63.79 
 
 
377 aa  308  2.0000000000000002e-82  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  63.37 
 
 
377 aa  305  1.0000000000000001e-81  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  64.02 
 
 
395 aa  305  2.0000000000000002e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  62.87 
 
 
371 aa  303  3.0000000000000004e-81  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  61.13 
 
 
377 aa  286  4e-76  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  59.24 
 
 
391 aa  282  7.000000000000001e-75  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  58.51 
 
 
361 aa  273  5.000000000000001e-72  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  55.56 
 
 
383 aa  263  6.999999999999999e-69  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  48.58 
 
 
369 aa  262  8.999999999999999e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_009457  VC0395_A0913  hypothetical protein  56.65 
 
 
492 aa  261  2e-68  Vibrio cholerae O395  Bacteria  normal  0.512089  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  55.23 
 
 
370 aa  260  3e-68  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0963  response regulator  52.61 
 
 
441 aa  254  3e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2833  response regulator receiver modulated metal dependent phosphohydrolase  56.43 
 
 
360 aa  252  1e-65  Thauera sp. MZ1T  Bacteria  normal  0.809465  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  54.39 
 
 
375 aa  251  2e-65  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_011312  VSAL_I2231  putative metal dependent phosphohydrolase  52.73 
 
 
440 aa  243  6e-63  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3778  response regulator  49.6 
 
 
629 aa  240  5e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  54.89 
 
 
377 aa  238  1e-61  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_010524  Lcho_1463  response regulator receiver modulated metal dependent phosphohydrolase  54.77 
 
 
364 aa  238  2e-61  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.404054 
 
 
-
 
NC_013173  Dbac_0632  metal dependent phosphohydrolase  54.87 
 
 
654 aa  234  2.0000000000000002e-60  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.0000219793  n/a   
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  52.81 
 
 
353 aa  235  2.0000000000000002e-60  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  53.25 
 
 
363 aa  232  1e-59  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  51.05 
 
 
365 aa  231  3e-59  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0055  metal dependent phosphohydrolase  55.94 
 
 
248 aa  230  4e-59  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  54.22 
 
 
359 aa  227  4e-58  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1420  putative PAS/PAC sensor protein  49.15 
 
 
543 aa  223  4.9999999999999996e-57  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.108233  n/a   
 
 
-
 
NC_007519  Dde_0263  metal dependent phosphohydrolase  51.07 
 
 
579 aa  221  1.9999999999999999e-56  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5503  response regulator receiver  47.7 
 
 
393 aa  218  2e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1904  response regulator receiver modulated metal dependent phosphohydrolase  47.72 
 
 
364 aa  215  1.9999999999999998e-54  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.430639  normal  0.0105316 
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  46.44 
 
 
393 aa  208  1e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1407  metal dependent phosphohydrolase  51.15 
 
 
691 aa  207  3e-52  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013522  Taci_1744  response regulator receiver modulated metal dependent phosphohydrolase  48.93 
 
 
373 aa  206  6e-52  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1897  metal-dependent phosphohydrolase  49.08 
 
 
671 aa  203  4e-51  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0881  putative PAS/PAC sensor protein  41.16 
 
 
537 aa  202  9.999999999999999e-51  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1421  putative PAS/PAC sensor protein  47.51 
 
 
535 aa  202  9.999999999999999e-51  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0232449  n/a   
 
 
-
 
NC_014148  Plim_0679  response regulator receiver  49.29 
 
 
337 aa  201  1.9999999999999998e-50  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0836964  n/a   
 
 
-
 
NC_009943  Dole_1678  putative PAS/PAC sensor protein  49.76 
 
 
625 aa  199  1.0000000000000001e-49  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0321383  n/a   
 
 
-
 
NC_009379  Pnuc_1166  metal dependent phosphohydrolase  47.96 
 
 
396 aa  197  3e-49  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  46.03 
 
 
365 aa  197  3e-49  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  45.76 
 
 
361 aa  195  1e-48  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_010814  Glov_2722  response regulator receiver modulated metal dependent phosphohydrolase  43.5 
 
 
378 aa  194  3e-48  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  43.48 
 
 
376 aa  192  1e-47  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  45.53 
 
 
354 aa  190  5e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  45.89 
 
 
348 aa  187  3e-46  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  45.89 
 
 
348 aa  187  5e-46  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  43.75 
 
 
350 aa  186  7e-46  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_008345  Sfri_2300  metal dependent phosphohydrolase  41.85 
 
 
407 aa  184  2.0000000000000003e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  45.49 
 
 
350 aa  183  5.0000000000000004e-45  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  44.7 
 
 
338 aa  182  1e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0097  putative PAS/PAC sensor protein  43.36 
 
 
319 aa  182  1e-44  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  44.39 
 
 
338 aa  181  2e-44  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  42.92 
 
 
352 aa  181  2.9999999999999997e-44  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  48.48 
 
 
331 aa  180  4e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  45.79 
 
 
331 aa  180  4.999999999999999e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44.24 
 
 
338 aa  180  4.999999999999999e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.24 
 
 
338 aa  180  5.999999999999999e-44  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.24 
 
 
338 aa  180  5.999999999999999e-44  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  45.02 
 
 
347 aa  179  7e-44  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  41.53 
 
 
346 aa  179  1e-43  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  42.62 
 
 
362 aa  179  1e-43  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  43.78 
 
 
340 aa  179  1e-43  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  44.09 
 
 
343 aa  178  2e-43  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  44.16 
 
 
379 aa  177  4e-43  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 
331 aa  177  4e-43  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 
331 aa  177  4e-43  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008741  Dvul_3024  response regulator receiver modulated metal dependent phosphohydrolase  41.13 
 
 
363 aa  177  4e-43  Desulfovibrio vulgaris DP4  Bacteria  normal  0.433593  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  38.52 
 
 
357 aa  177  5e-43  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  42.68 
 
 
363 aa  176  6e-43  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1281  metal dependent phosphohydrolase  45.97 
 
 
421 aa  176  9e-43  Shewanella baltica OS223  Bacteria  normal  normal  0.246487 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  43.56 
 
 
399 aa  175  9.999999999999999e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  43.56 
 
 
369 aa  175  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_009052  Sbal_3086  metal dependent phosphohydrolase  38.12 
 
 
421 aa  174  1.9999999999999998e-42  Shewanella baltica OS155  Bacteria  normal  0.688804  n/a   
 
 
-
 
NC_009997  Sbal195_3239  metal dependent phosphohydrolase  38.32 
 
 
421 aa  174  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  43.56 
 
 
369 aa  175  1.9999999999999998e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_009665  Shew185_3096  metal dependent phosphohydrolase  45.5 
 
 
421 aa  174  2.9999999999999996e-42  Shewanella baltica OS185  Bacteria  normal  0.789641  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  37.1 
 
 
357 aa  174  2.9999999999999996e-42  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_013216  Dtox_4196  response regulator receiver modulated metal dependent phosphohydrolase  42.22 
 
 
350 aa  174  2.9999999999999996e-42  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  46.91 
 
 
328 aa  172  1e-41  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.66 
 
 
268 aa  171  2e-41  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  44.89 
 
 
487 aa  171  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_009092  Shew_1882  metal dependent phosphohydrolase  44.93 
 
 
428 aa  172  2e-41  Shewanella loihica PV-4  Bacteria  normal  normal  0.898808 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  44.95 
 
 
331 aa  171  2e-41  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  41.94 
 
 
339 aa  171  3e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  43.24 
 
 
344 aa  171  3e-41  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 
338 aa  170  4e-41  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  43.52 
 
 
523 aa  171  4e-41  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 
338 aa  170  4e-41  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 
338 aa  170  4e-41  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  42.4 
 
 
338 aa  171  4e-41  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  44.54 
 
 
365 aa  170  4e-41  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  39.53 
 
 
385 aa  169  7e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  43.1 
 
 
357 aa  169  8e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_2017  response regulator receiver modulated metal dependent phosphohydrolase  42.42 
 
 
379 aa  169  8e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.98115  n/a   
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  35.4 
 
 
362 aa  169  9e-41  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01891  hypothetical protein  59.38 
 
 
147 aa  169  1e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  40.64 
 
 
367 aa  169  1e-40  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  46.07 
 
 
337 aa  168  2e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  45.73 
 
 
356 aa  168  2e-40  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
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