15 homologs were found in PanDaTox collection
for query gene Pden_3925 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008687  Pden_3925  SARP family transcriptional regulator  100 
 
 		 528 aa  1031    Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011981  Avi_7646  TPR repeat-containing protein  27.89 
 
 		 529 aa  137  5e-31  Agrobacterium vitis S4  Bacteria  normal  0.158995  n/a   
 
 
-
 
NC_007802  Jann_1578  SARP family transcriptional regulator  28.14 
 
 		 530 aa  130  4.0000000000000003e-29  Jannaschia sp. CCS1  Bacteria  normal  0.584481  normal  1 
 
 
-
 
NC_007802  Jann_3528  SARP family transcriptional regulator  27.64 
 
 		 539 aa  112  2.0000000000000002e-23  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.0172625 
 
 
-
 
NC_009428  Rsph17025_2731  SARP family transcriptional regulator  38.64 
 
 		 644 aa  77.8  0.0000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.92 
 
 
-
 
NC_007493  RSP_1299  hypothetical protein  38.93 
 
 		 644 aa  75.9  0.000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.135233  n/a   
 
 
-
 
NC_009049  Rsph17029_2958  SARP family transcriptional regulator  38.93 
 
 		 644 aa  75.5  0.000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.30707  normal  0.853466 
 
 
-
 
NC_012848  Rleg_5023  transcriptional regulator, SARP family  39.39 
 
 		 623 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.494336  normal  0.650955 
 
 
-
 
NC_009952  Dshi_0870  transcriptional regulator  40.74 
 
 		 679 aa  65.1  0.000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.918273 
 
 
-
 
NC_007778  RPB_0861  TPR repeat-containing protein  24.42 
 
 		 580 aa  59.3  0.0000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0968  TPR repeat-containing protein  24.81 
 
 		 584 aa  56.2  0.000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_2258  SARP family transcriptional regulator  36.44 
 
 		 647 aa  55.8  0.000002  Jannaschia sp. CCS1  Bacteria  normal  0.0203775  normal  1 
 
 
-
 
NC_011004  Rpal_5193  Tetratricopeptide TPR_2 repeat protein  29.14 
 
 		 582 aa  53.9  0.000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.117733  n/a   
 
 
-
 
NC_009427  Saro_3797  SARP family transcriptional regulator  35.97 
 
 		 584 aa  48.1  0.0004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.231924  n/a   
 
 
-
 
NC_013422  Hneap_1165  Tetratricopeptide TPR_2 repeat protein  32.95 
 
 		 574 aa  43.9  0.007  Halothiobacillus neapolitanus c2  Bacteria  normal  0.96712  n/a   
 
 
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