72 homologs were found in PanDaTox collection
for query gene Nham_4032 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_4032  hypothetical protein  100 
 
 
224 aa  454  1e-127  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009475  BBta_p0025  putative cAMP-induced filamentation protein  58.8 
 
 
390 aa  259  2e-68  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.337972 
 
 
-
 
NC_013173  Dbac_2534  filamentation induced by cAMP protein Fic  55.71 
 
 
397 aa  259  3e-68  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0093  filamentation induced by cAMP protein Fic  48.17 
 
 
404 aa  215  5e-55  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1372  fic family protein  45.87 
 
 
388 aa  194  7e-49  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009468  Acry_3358  filamentation induced by cAMP protein Fic  44.14 
 
 
413 aa  191  1e-47  Acidiphilium cryptum JF-5  Bacteria  normal  0.855479  n/a   
 
 
-
 
NC_009483  Gura_0426  filamentation induced by cAMP protein Fic  41.38 
 
 
417 aa  184  1.0000000000000001e-45  Geobacter uraniireducens Rf4  Bacteria  normal  0.444251  n/a   
 
 
-
 
NC_011060  Ppha_2460  filamentation induced by cAMP protein Fic  43.69 
 
 
396 aa  178  5.999999999999999e-44  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_4061  filamentation induced by cAMP protein Fic  42.48 
 
 
397 aa  178  8e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_2840  filamentation induced by cAMP protein Fic  41.56 
 
 
411 aa  173  1.9999999999999998e-42  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0851  filamentation induced by cAMP protein Fic  40.53 
 
 
404 aa  170  2e-41  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4217  hypothetical protein  44.09 
 
 
400 aa  170  2e-41  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.921636  normal  0.168634 
 
 
-
 
NC_012791  Vapar_3790  filamentation induced by cAMP protein Fic  40.36 
 
 
402 aa  165  5.9999999999999996e-40  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009957  Dshi_4020  filamentation induced by cAMP protein Fic  43.64 
 
 
400 aa  164  9e-40  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.142086  n/a   
 
 
-
 
NC_007512  Plut_1908  hypothetical protein  41.63 
 
 
395 aa  163  2.0000000000000002e-39  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.396319 
 
 
-
 
NC_007948  Bpro_0014  filamentation induced by cAMP protein Fic  41.98 
 
 
406 aa  155  4e-37  Polaromonas sp. JS666  Bacteria  normal  normal  0.446578 
 
 
-
 
NC_010725  Mpop_2298  filamentation induced by cAMP protein Fic  42.66 
 
 
413 aa  155  5.0000000000000005e-37  Methylobacterium populi BJ001  Bacteria  normal  0.266378  normal  0.174945 
 
 
-
 
NC_012560  Avin_36540  Fic (filamentation induced by cAMP) protein  38.36 
 
 
374 aa  154  1e-36  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0896  filamentation induced by cAMP protein Fic  43.37 
 
 
406 aa  152  5e-36  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008757  Pnap_4423  filamentation induced by cAMP protein Fic  37.38 
 
 
407 aa  147  9e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.395598 
 
 
-
 
NC_008740  Maqu_0445  filamentation induced by cAMP protein Fic  37.12 
 
 
401 aa  146  3e-34  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4624  filamentation induced by cAMP protein Fic  37.19 
 
 
397 aa  141  9.999999999999999e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.946577 
 
 
-
 
NC_008391  Bamb_4212  filamentation induced by cAMP protein Fic  36.24 
 
 
424 aa  136  3.0000000000000003e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.515355  normal  0.918692 
 
 
-
 
NC_007511  Bcep18194_B0861  filamentation induced by cAMP protein Fic  35.98 
 
 
400 aa  135  5e-31  Burkholderia sp. 383  Bacteria  normal  normal  0.244501 
 
 
-
 
NC_009943  Dole_1842  filamentation induced by cAMP protein Fic  32.48 
 
 
417 aa  125  5e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2568  filamentation induced by cAMP protein Fic  34.8 
 
 
410 aa  108  6e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_3428  filamentation induced by cAMP protein Fic  28.33 
 
 
380 aa  66.2  0.0000000004  Dickeya dadantii Ech703  Bacteria  normal  0.469085  n/a   
 
 
-
 
NC_013421  Pecwa_0711  filamentation induced by cAMP protein Fic  33.05 
 
 
380 aa  64.7  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  27.96 
 
 
394 aa  62.4  0.000000006  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_013173  Dbac_0753  filamentation induced by cAMP protein Fic  34.34 
 
 
386 aa  61.2  0.00000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.424532  n/a   
 
 
-
 
NC_013512  Sdel_0460  filamentation induced by cAMP protein Fic  29.85 
 
 
388 aa  60.8  0.00000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  26.98 
 
 
380 aa  55.5  0.0000007  Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_009708  YpsIP31758_0896  Fic family protein  26.98 
 
 
380 aa  55.5  0.0000007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  26.98 
 
 
380 aa  55.5  0.0000007  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4508  filamentation induced by cAMP protein Fic  35.82 
 
 
317 aa  50.1  0.00002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3251  filamentation induced by cAMP protein Fic  28.49 
 
 
393 aa  49.7  0.00004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0798212  n/a   
 
 
-
 
NC_011830  Dhaf_4488  filamentation induced by cAMP protein Fic  24.6 
 
 
380 aa  47.8  0.0001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_33230  hypothetical protein  42.42 
 
 
408 aa  47.8  0.0001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_002978  WD1314  Fic family protein  25.14 
 
 
359 aa  47  0.0003  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.148349  n/a   
 
 
-
 
NC_013411  GYMC61_1541  filamentation induced by cAMP protein Fic  31.07 
 
 
364 aa  45.8  0.0005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008309  HS_0216  hypothetical protein  28.32 
 
 
373 aa  45.4  0.0006  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0910  filamentation induced by cAMP protein Fic  28.36 
 
 
564 aa  45.4  0.0008  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.555407  normal 
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  35.62 
 
 
256 aa  45.1  0.0009  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  45 
 
 
328 aa  45.1  0.001  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_013161  Cyan8802_0201  filamentation induced by cAMP protein Fic  45.76 
 
 
488 aa  44.3  0.001  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00496594 
 
 
-
 
NC_012791  Vapar_1002  filamentation induced by cAMP protein Fic  41.27 
 
 
531 aa  44.3  0.001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4648  hypothetical protein  26.02 
 
 
384 aa  44.3  0.001  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00489554  normal 
 
 
-
 
NC_008825  Mpe_A0010  hypothetical protein  47.83 
 
 
383 aa  44.3  0.001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3268  filamentation induced by cAMP protein Fic  34.88 
 
 
381 aa  44.3  0.001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.592904  normal 
 
 
-
 
NC_007796  Mhun_1731  filamentation induced by cAMP protein Fic  27.22 
 
 
380 aa  43.9  0.002  Methanospirillum hungatei JF-1  Archaea  normal  0.142592  normal 
 
 
-
 
NC_009621  Smed_6016  filamentation induced by cAMP protein Fic  27.87 
 
 
343 aa  43.9  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.00688605 
 
 
-
 
NC_013595  Sros_0601  hypothetical protein  38.98 
 
 
321 aa  43.9  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05510  hypothetical protein  28.26 
 
 
394 aa  43.9  0.002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0293  filamentation induced by cAMP protein Fic  33.71 
 
 
219 aa  43.5  0.003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_2003  fic family protein  26.37 
 
 
377 aa  43.1  0.003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0278833  n/a   
 
 
-
 
NC_013757  Gobs_3761  filamentation induced by cAMP protein Fic  51.35 
 
 
430 aa  43.5  0.003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.651271  n/a   
 
 
-
 
NC_012560  Avin_49750  filamentation induced by cAMP protein  37.04 
 
 
509 aa  43.5  0.003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0004  mobile mystery protein B  57.14 
 
 
196 aa  43.1  0.003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_2358  filamentation induced by cAMP protein Fic  26.32 
 
 
371 aa  43.5  0.003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_22980  hypothetical protein  43.33 
 
 
406 aa  43.1  0.004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.249401  n/a   
 
 
-
 
NC_008740  Maqu_3381  filamentation induced by cAMP protein Fic  30.26 
 
 
204 aa  42.7  0.005  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2002  filamentation induced by cAMP protein Fic  21.76 
 
 
375 aa  42.7  0.005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.733317  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  34.72 
 
 
348 aa  42.4  0.005  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  34.72 
 
 
348 aa  42.4  0.005  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_013730  Slin_2152  filamentation induced by cAMP protein Fic  41.86 
 
 
374 aa  42.4  0.005  Spirosoma linguale DSM 74  Bacteria  normal  0.164511  normal  0.297035 
 
 
-
 
NC_008752  Aave_1516  filamentation induced by cAMP protein Fic  47.06 
 
 
256 aa  42.4  0.006  Acidovorax citrulli AAC00-1  Bacteria  normal  0.183855  normal  0.241646 
 
 
-
 
NC_008709  Ping_2528  filamentation induced by cAMP protein Fic  26.67 
 
 
357 aa  41.6  0.009  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0233  fic family protein  28.26 
 
 
377 aa  41.6  0.009  Treponema denticola ATCC 35405  Bacteria  normal  0.638848  n/a   
 
 
-
 
NC_013739  Cwoe_2194  filamentation induced by cAMP protein Fic  40 
 
 
400 aa  41.6  0.009  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3516  filamentation induced by cAMP protein Fic  34.48 
 
 
207 aa  41.6  0.009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.438285 
 
 
-
 
NC_013169  Ksed_25050  hypothetical protein  30.06 
 
 
397 aa  41.6  0.01  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009430  Rsph17025_4231  hypothetical protein  35.06 
 
 
364 aa  41.6  0.01  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.758484 
 
 
-
 
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