Gene RPD_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0910 
Symbol 
ID4021385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1026510 
End bp1028204 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content60% 
IMG OID637961101 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_568049 
Protein GI91975390 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.555407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTG AACGTTTTCC CGCGAACGGC ACATATTTTG AACGTTTCGC CGTGAGACTG 
AACGTTTTTC CGCGTCGAGG GCATTTTTGG CCGGCCGAGA CCTTCCTTGA ACGATTTTCC
GCGGAAGATC ATAATATTGA ACGTTTCGCC GCGCGATTGA ACGATTTTCC GCCCGGGCCG
CCGGTTTTGA ACCAGGAGTT CCACTTGCAG AACCAGAGCC TAGGCCAACT CCGCCTCCAT
GAGATGCTGG AGCTCGACGT GCCGAAGCCC CACGTGCGCT CGACGGCGGT CCGCGGCAAT
CGTCGGACCA TCGAGGGACA GGACGCACTG ATCGAACAGT TTCCTCCCCG GTACGTCCCG
GAAGACAACG CGGTCGGACA TCTCAGGTTC GCGCTACGTC ACGAACCGCT GGACATGGGA
GTCCTGACAG CCGCCCTCAA GGCGATGCCG AAGCAGGACA TCGAGACCTG GATCAAGTCC
AAGCCGACCG GCGCCGTCTC GCGACGGGCA TGGTTTCTCT ATGAGACGCT GACCGGCGAC
ACGCTCGACA TCGAAGACGC CGGCGCGGTG ACTTACGTCG ACGCCCTGGA TCCCGAACGG
CACATCGTCG GGAACGGCGC GCGATCCCGC AGGCACAAGG TGACGAACAA TCTCCTCGGA
GTGCCCGGCC TCTTCCTCAC CGTACGGCGG ACCGCGAAGA TCCAGCAGCA CATCGCGGAG
AAGCTCGACG AAGTCGCGAA GGCGTACACG GAGAATGTGC CCGCCGAGAC GCTGATGCGG
GCCGTGCAGT ACCTGTACAC GAAGGAAACG AAATCCTCCT TCGAGATCGA ACACGAAAGG
CCGACGCCGG AGAAGGAACG GCGCTTCATC GCCGCGCTCG AGCAGGGCGA GAAGTTCGAC
CCGACCGACG AGAAGGGTCT CATCGCGCTT CAGAACGAGA TCGTCGACCC GAGATACGCC
GCCTCGGACG TCCGCGATTT CCAGAACTTC GTGGGCGAAA CTCTCGGCTC GCACCGGGAG
AAGGTGCATT TCGTCTGCCC GAAACCGGAG GACGTGAAGC CTCTGATATC GGACTGGATG
AAGATGACTG CGCGCCTCAA GCAGGACGCC GAGCCCGTCA CCGCGGCGGC GCTGATCGCC
TTCACGTTCG TCTTCATCCA TCCGTTCGAG GACGGAAACG GCCGCATCCA CCGTTTCCTG
ATCCATCACG TGCTGTCGTC CCAGAACTAC ACGCCCAAAG GAATCATCTT TCCGGTCTCG
GCGGCGATCC TGCGCGACAT CAAGGAGTAC GACACCGCCC TCGCAAGCTA CTCCGATCCG
CTTCTCGCAC ACGTCAAGTA CAGGATGACG CCGAAGAACG AAGTCGAGGT CCTGAACGAG
ACAGCGCACC TCTACCGATA CTTCGACGCG ACCCGCTTCG TCGAATACCT CTACGACAAG
CTTGCGGAGA CGATCGCCAT CGACCTCAAG GAGGAAGTCG AGTTCGTCGA GAAGTTCGAC
CGTGCCTACA CCGCGGTGAC GAACCAGATC GACATGCCGA ACAGGCGCGC GTCGTTGTTC
GTCCGCGCCT GCATGCAGAA CGCCGGAAAG CTTTCGAAGA AGAAACGCGA GCAGTTTCCC
GAGTTGACCG ACGAGGAGAT CACAATGATC GAGGAAGCCA TCGCGGAAGC GCTGGCTGAA
CTCGACGAGT CTTAG
 
Protein sequence
MAFERFPANG TYFERFAVRL NVFPRRGHFW PAETFLERFS AEDHNIERFA ARLNDFPPGP 
PVLNQEFHLQ NQSLGQLRLH EMLELDVPKP HVRSTAVRGN RRTIEGQDAL IEQFPPRYVP
EDNAVGHLRF ALRHEPLDMG VLTAALKAMP KQDIETWIKS KPTGAVSRRA WFLYETLTGD
TLDIEDAGAV TYVDALDPER HIVGNGARSR RHKVTNNLLG VPGLFLTVRR TAKIQQHIAE
KLDEVAKAYT ENVPAETLMR AVQYLYTKET KSSFEIEHER PTPEKERRFI AALEQGEKFD
PTDEKGLIAL QNEIVDPRYA ASDVRDFQNF VGETLGSHRE KVHFVCPKPE DVKPLISDWM
KMTARLKQDA EPVTAAALIA FTFVFIHPFE DGNGRIHRFL IHHVLSSQNY TPKGIIFPVS
AAILRDIKEY DTALASYSDP LLAHVKYRMT PKNEVEVLNE TAHLYRYFDA TRFVEYLYDK
LAETIAIDLK EEVEFVEKFD RAYTAVTNQI DMPNRRASLF VRACMQNAGK LSKKKREQFP
ELTDEEITMI EEAIAEALAE LDES