Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0910 |
Symbol | |
ID | 4021385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1026510 |
End bp | 1028204 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637961101 |
Product | filamentation induced by cAMP protein Fic |
Protein accession | YP_568049 |
Protein GI | 91975390 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.555407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTG AACGTTTTCC CGCGAACGGC ACATATTTTG AACGTTTCGC CGTGAGACTG AACGTTTTTC CGCGTCGAGG GCATTTTTGG CCGGCCGAGA CCTTCCTTGA ACGATTTTCC GCGGAAGATC ATAATATTGA ACGTTTCGCC GCGCGATTGA ACGATTTTCC GCCCGGGCCG CCGGTTTTGA ACCAGGAGTT CCACTTGCAG AACCAGAGCC TAGGCCAACT CCGCCTCCAT GAGATGCTGG AGCTCGACGT GCCGAAGCCC CACGTGCGCT CGACGGCGGT CCGCGGCAAT CGTCGGACCA TCGAGGGACA GGACGCACTG ATCGAACAGT TTCCTCCCCG GTACGTCCCG GAAGACAACG CGGTCGGACA TCTCAGGTTC GCGCTACGTC ACGAACCGCT GGACATGGGA GTCCTGACAG CCGCCCTCAA GGCGATGCCG AAGCAGGACA TCGAGACCTG GATCAAGTCC AAGCCGACCG GCGCCGTCTC GCGACGGGCA TGGTTTCTCT ATGAGACGCT GACCGGCGAC ACGCTCGACA TCGAAGACGC CGGCGCGGTG ACTTACGTCG ACGCCCTGGA TCCCGAACGG CACATCGTCG GGAACGGCGC GCGATCCCGC AGGCACAAGG TGACGAACAA TCTCCTCGGA GTGCCCGGCC TCTTCCTCAC CGTACGGCGG ACCGCGAAGA TCCAGCAGCA CATCGCGGAG AAGCTCGACG AAGTCGCGAA GGCGTACACG GAGAATGTGC CCGCCGAGAC GCTGATGCGG GCCGTGCAGT ACCTGTACAC GAAGGAAACG AAATCCTCCT TCGAGATCGA ACACGAAAGG CCGACGCCGG AGAAGGAACG GCGCTTCATC GCCGCGCTCG AGCAGGGCGA GAAGTTCGAC CCGACCGACG AGAAGGGTCT CATCGCGCTT CAGAACGAGA TCGTCGACCC GAGATACGCC GCCTCGGACG TCCGCGATTT CCAGAACTTC GTGGGCGAAA CTCTCGGCTC GCACCGGGAG AAGGTGCATT TCGTCTGCCC GAAACCGGAG GACGTGAAGC CTCTGATATC GGACTGGATG AAGATGACTG CGCGCCTCAA GCAGGACGCC GAGCCCGTCA CCGCGGCGGC GCTGATCGCC TTCACGTTCG TCTTCATCCA TCCGTTCGAG GACGGAAACG GCCGCATCCA CCGTTTCCTG ATCCATCACG TGCTGTCGTC CCAGAACTAC ACGCCCAAAG GAATCATCTT TCCGGTCTCG GCGGCGATCC TGCGCGACAT CAAGGAGTAC GACACCGCCC TCGCAAGCTA CTCCGATCCG CTTCTCGCAC ACGTCAAGTA CAGGATGACG CCGAAGAACG AAGTCGAGGT CCTGAACGAG ACAGCGCACC TCTACCGATA CTTCGACGCG ACCCGCTTCG TCGAATACCT CTACGACAAG CTTGCGGAGA CGATCGCCAT CGACCTCAAG GAGGAAGTCG AGTTCGTCGA GAAGTTCGAC CGTGCCTACA CCGCGGTGAC GAACCAGATC GACATGCCGA ACAGGCGCGC GTCGTTGTTC GTCCGCGCCT GCATGCAGAA CGCCGGAAAG CTTTCGAAGA AGAAACGCGA GCAGTTTCCC GAGTTGACCG ACGAGGAGAT CACAATGATC GAGGAAGCCA TCGCGGAAGC GCTGGCTGAA CTCGACGAGT CTTAG
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Protein sequence | MAFERFPANG TYFERFAVRL NVFPRRGHFW PAETFLERFS AEDHNIERFA ARLNDFPPGP PVLNQEFHLQ NQSLGQLRLH EMLELDVPKP HVRSTAVRGN RRTIEGQDAL IEQFPPRYVP EDNAVGHLRF ALRHEPLDMG VLTAALKAMP KQDIETWIKS KPTGAVSRRA WFLYETLTGD TLDIEDAGAV TYVDALDPER HIVGNGARSR RHKVTNNLLG VPGLFLTVRR TAKIQQHIAE KLDEVAKAYT ENVPAETLMR AVQYLYTKET KSSFEIEHER PTPEKERRFI AALEQGEKFD PTDEKGLIAL QNEIVDPRYA ASDVRDFQNF VGETLGSHRE KVHFVCPKPE DVKPLISDWM KMTARLKQDA EPVTAAALIA FTFVFIHPFE DGNGRIHRFL IHHVLSSQNY TPKGIIFPVS AAILRDIKEY DTALASYSDP LLAHVKYRMT PKNEVEVLNE TAHLYRYFDA TRFVEYLYDK LAETIAIDLK EEVEFVEKFD RAYTAVTNQI DMPNRRASLF VRACMQNAGK LSKKKREQFP ELTDEEITMI EEAIAEALAE LDES
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