More than 300 homologs were found in PanDaTox collection
for query gene Msed_0148 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009440  Msed_0148  biotin/lipoyl attachment domain-containing protein  100 
 
 
167 aa  334  2.9999999999999997e-91  Metallosphaera sedula DSM 5348  Archaea  normal  hitchhiker  0.00853236 
 
 
-
 
CP001800  Ssol_0269  biotin/lipoyl attachment domain-containing protein  54.44 
 
 
169 aa  194  3e-49  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0612  pyruvate carboxylase subunit B  52.86 
 
 
569 aa  72.8  0.000000000002  Methanococcus maripaludis C6  Archaea  normal  0.86669  n/a   
 
 
-
 
NC_013061  Phep_4063  biotin/lipoyl attachment domain-containing protein  32.17 
 
 
165 aa  72.8  0.000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009637  MmarC7_1341  pyruvate carboxylase subunit B  51.43 
 
 
569 aa  72.4  0.000000000003  Methanococcus maripaludis C7  Archaea  normal  normal  0.421509 
 
 
-
 
NC_009135  MmarC5_1334  pyruvate carboxylase subunit B  51.43 
 
 
569 aa  71.6  0.000000000005  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_011691  PHATRDRAFT_30519  precursor of carboxylase pyruvate carboxylase  53.62 
 
 
1252 aa  71.2  0.000000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_013441  Gbro_3828  Carbamoyl-phosphate synthase L chain ATP- binding protein  47.14 
 
 
672 aa  70.5  0.000000000009  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_1005  pyruvate carboxylase subunit B  46.05 
 
 
567 aa  70.1  0.00000000001  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007643  Rru_A1941  3-methylcrotonoyl-CoA carboxylase, alpha subunit  33.33 
 
 
686 aa  67.8  0.00000000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.891813  n/a   
 
 
-
 
NC_013739  Cwoe_2457  pyruvate carboxylase  30.15 
 
 
1127 aa  66.6  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.000300234 
 
 
-
 
NC_009047  PICST_90975  Pyruvate carboxylase  30.16 
 
 
1179 aa  66.6  0.0000000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.301663  normal  0.518395 
 
 
-
 
NC_013730  Slin_4454  pyruvate carboxylase  49.28 
 
 
1149 aa  66.2  0.0000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1876  carbamoyl-phosphate synthase L chain ATP-binding  47.14 
 
 
621 aa  65.1  0.0000000004  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1751  pyruvate carboxylase  39.53 
 
 
1124 aa  65.1  0.0000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.942344  n/a   
 
 
-
 
NC_012560  Avin_02060  pyruvate carboxylase subunit B  33.33 
 
 
599 aa  64.7  0.0000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4478  pyruvate carboxylase subunit B  36.64 
 
 
602 aa  64.7  0.0000000006  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0461  hypothetical protein  43.75 
 
 
661 aa  64.7  0.0000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.00676863  normal  0.0747191 
 
 
-
 
NC_012791  Vapar_4719  Carbamoyl-phosphate synthase L chain ATP-binding  32.09 
 
 
667 aa  63.5  0.000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3669  urea amidolyase related protein  51.52 
 
 
1234 aa  62.8  0.000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6223  pyruvate carboxylase subunit B  36.43 
 
 
607 aa  62  0.000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0342  carbamoyl-phosphate synthase L chain, ATP-binding  33.77 
 
 
704 aa  62.4  0.000000003  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2464  carbamoyl-phosphate synthase L chain, ATP-binding protein  45.71 
 
 
580 aa  62.4  0.000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0115  Carbamoyl-phosphate synthase L chain ATP-binding  44.12 
 
 
664 aa  62.4  0.000000003  Ralstonia pickettii 12D  Bacteria  normal  normal  0.951631 
 
 
-
 
NC_008463  PA14_71720  pyruvate carboxylase subunit B  36.43 
 
 
607 aa  62  0.000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2153  carbamoyl-phosphate synthase L chain ATP- binding protein  41.98 
 
 
643 aa  62  0.000000004  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  40.54 
 
 
655 aa  62  0.000000004  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3202  carbamoyl-phosphate synthase L chain, ATP-binding protein  29.77 
 
 
677 aa  62  0.000000004  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3213  carbamoyl-phosphate synthase L chain, ATP-binding  29.77 
 
 
677 aa  62  0.000000004  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3264  carbamoyl-phosphate synthase L chain, ATP-binding  29.77 
 
 
677 aa  62  0.000000004  Mycobacterium sp. KMS  Bacteria  normal  0.079197  normal 
 
 
-
 
NC_013510  Tcur_1976  Carbamoyl-phosphate synthase L chain ATP- binding protein  44.93 
 
 
652 aa  61.6  0.000000005  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.000860276  n/a   
 
 
-
 
NC_007348  Reut_B4460  carbamoyl-phosphate synthase subunit L  41.43 
 
 
667 aa  61.6  0.000000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3200  carbamoyl-phosphate synthase L chain, ATP-binding  47.69 
 
 
664 aa  61.6  0.000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0237038  normal  0.361734 
 
 
-
 
NC_009485  BBta_0676  putative biotin carboxylase  32.58 
 
 
651 aa  61.6  0.000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.367436 
 
 
-
 
BN001303  ANIA_04462  pyruvate carboxylase (Eurofung)  33.06 
 
 
1196 aa  61.2  0.000000006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.736357  normal 
 
 
-
 
NC_009484  Acry_2669  pyruvate carboxylase  46.38 
 
 
1164 aa  61.2  0.000000006  Acidiphilium cryptum JF-5  Bacteria  normal  0.0529984  n/a   
 
 
-
 
NC_013159  Svir_16520  acetyl/propionyl-CoA carboxylase, alpha subunit  42.65 
 
 
666 aa  61.2  0.000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0519  pyruvate carboxylase  50 
 
 
1144 aa  61.2  0.000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1435  pyruvate carboxylase subunit B  41.43 
 
 
638 aa  60.8  0.000000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.0000000897989  n/a   
 
 
-
 
NC_007908  Rfer_3830  carbamoyl-phosphate synthase L chain, ATP-binding  36.96 
 
 
674 aa  60.8  0.000000008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3434  Carbamoyl-phosphate synthase L chain ATP-binding  38.24 
 
 
626 aa  60.5  0.000000009  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007204  Psyc_0311  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.06 
 
 
706 aa  60.8  0.000000009  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  41.43 
 
 
674 aa  60.8  0.000000009  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2163  carbamoyl-phosphate synthase L chain, ATP-binding  42.86 
 
 
623 aa  60.8  0.000000009  Sphingomonas wittichii RW1  Bacteria  normal  0.0578924  normal  0.656979 
 
 
-
 
NC_010682  Rpic_0108  Carbamoyl-phosphate synthase L chain ATP-binding  44.12 
 
 
664 aa  60.8  0.000000009  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2390  biotin/lipoyl attachment domain-containing protein  29.85 
 
 
168 aa  60.5  0.00000001  Spirosoma linguale DSM 74  Bacteria  normal  0.0158727  normal 
 
 
-
 
NC_012854  Rleg_6512  Carbamoyl-phosphate synthase L chain ATP-binding  44.93 
 
 
621 aa  60.1  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0609774 
 
 
-
 
NC_008705  Mkms_1887  biotin carboxylation domain-containing protein  39.13 
 
 
1205 aa  60.5  0.00000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  38.04 
 
 
665 aa  60.5  0.00000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_010676  Bphyt_4689  Carbamoyl-phosphate synthase L chain ATP-binding  41.67 
 
 
692 aa  60.1  0.00000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0963  3-methylcrotonoyl-CoA carboxylase, alpha subunit  41.67 
 
 
679 aa  60.1  0.00000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.5845 
 
 
-
 
NC_008146  Mmcs_1840  allophanate hydrolase  39.13 
 
 
1205 aa  60.5  0.00000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1821  biotin carboxylation domain-containing protein  39.13 
 
 
1205 aa  60.5  0.00000001  Mycobacterium sp. JLS  Bacteria  normal  0.234186  normal 
 
 
-
 
NC_013440  Hoch_1857  Carbamoyl-phosphate synthase L chain ATP- binding protein  37.35 
 
 
700 aa  60.1  0.00000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.737896  normal 
 
 
-
 
NC_013595  Sros_6412  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.45 
 
 
656 aa  60.1  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.792756  normal  0.0296411 
 
 
-
 
BN001303  ANIA_04690  3-methylcrotonyl-CoA carboxylase biotin-containig subunit3-methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4);(EC 6.4.1.4) [Source:UniProtKB/TrEMBL;Acc:Q6T5L7]  34.69 
 
 
712 aa  59.3  0.00000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.403972  normal 
 
 
-
 
NC_008699  Noca_4551  carbamoyl-phosphate synthase L chain, ATP-binding  37.78 
 
 
633 aa  59.3  0.00000002  Nocardioides sp. JS614  Bacteria  normal  0.282138  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3773  pyruvate carboxylase  41.25 
 
 
1148 aa  59.7  0.00000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.333  n/a   
 
 
-
 
NC_010002  Daci_5970  carbamoyl-phosphate synthase L chain ATP-binding  32.06 
 
 
672 aa  59.3  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1882  pyruvate carboxylase  44.62 
 
 
662 aa  59.7  0.00000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.111652 
 
 
-
 
NC_011831  Cagg_2537  acetyl-CoA carboxylase, biotin carboxylase  49.21 
 
 
590 aa  59.3  0.00000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.232961  normal 
 
 
-
 
NC_010623  Bphy_3559  carbamoyl-phosphate synthase L chain ATP-binding  42.03 
 
 
670 aa  59.3  0.00000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.733851 
 
 
-
 
NC_008782  Ajs_3759  3-methylcrotonoyl-CoA carboxylase, alpha subunit  31.78 
 
 
672 aa  59.7  0.00000002  Acidovorax sp. JS42  Bacteria  normal  normal  0.746239 
 
 
-
 
NC_007644  Moth_1155  biotin/lipoyl attachment  51.52 
 
 
128 aa  59.3  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.849643  normal 
 
 
-
 
NC_008786  Veis_0847  carbamoyl-phosphate synthase L chain, ATP-binding  45.16 
 
 
730 aa  59.7  0.00000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2116  carbamoyl-phosphate synthase L chain ATP-binding  30.6 
 
 
692 aa  59.3  0.00000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.278717 
 
 
-
 
NC_010730  SYO3AOP1_0139  pyruvate carboxylase subunit B  43.94 
 
 
616 aa  59.7  0.00000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0177448  n/a   
 
 
-
 
NC_008347  Mmar10_1142  pyruvate carboxylase  40.58 
 
 
1146 aa  59.3  0.00000002  Maricaulis maris MCS10  Bacteria  normal  0.0248368  normal  0.044238 
 
 
-
 
NC_009565  TBFG_10991  acetyl-/propionyl-coenzyme A carboxylase subunit alpha  38.03 
 
 
667 aa  59.3  0.00000002  Mycobacterium tuberculosis F11  Bacteria  normal  0.661378  normal  0.811599 
 
 
-
 
NC_008726  Mvan_2165  pyruvate carboxylase  50 
 
 
1145 aa  59.7  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1133  Carbamoyl-phosphate synthase L chain ATP-binding  30.65 
 
 
657 aa  59.7  0.00000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0279279 
 
 
-
 
NC_002936  DET0119  pyruvate carboxylase subunit B  42.03 
 
 
584 aa  58.9  0.00000003  Dehalococcoides ethenogenes 195  Bacteria  normal  0.698581  n/a   
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  38.36 
 
 
674 aa  58.9  0.00000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2997  pyruvate carboxylase., propionyl-CoA carboxylase  46.27 
 
 
1112 aa  59.3  0.00000003  Ralstonia eutropha JMP134  Bacteria  normal  0.717985  n/a   
 
 
-
 
NC_013889  TK90_1606  oxaloacetate decarboxylase alpha subunit  42.86 
 
 
608 aa  58.9  0.00000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0818232  normal 
 
 
-
 
NC_007643  Rru_A2317  pyruvate carboxylase  37.84 
 
 
1146 aa  58.9  0.00000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4048  carbamoyl-phosphate synthase L chain ATP-binding  44.93 
 
 
700 aa  58.9  0.00000003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.197426 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  40.91 
 
 
679 aa  58.9  0.00000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_008705  Mkms_4393  pyruvate carboxylase  40 
 
 
645 aa  58.9  0.00000003  Mycobacterium sp. KMS  Bacteria  normal  0.318019  normal 
 
 
-
 
NC_008146  Mmcs_4307  pyruvate carboxylase  40 
 
 
645 aa  58.9  0.00000003  Mycobacterium sp. MCS  Bacteria  normal  0.295929  n/a   
 
 
-
 
NC_008781  Pnap_0475  carbamoyl-phosphate synthase L chain, ATP-binding  41.18 
 
 
670 aa  58.9  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4535  carbamoyl-phosphate synthase L chain ATP-binding  46.38 
 
 
662 aa  58.9  0.00000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4687  pyruvate carboxylase  40 
 
 
645 aa  58.9  0.00000003  Mycobacterium sp. JLS  Bacteria  normal  normal  0.880819 
 
 
-
 
NC_008599  CFF8240_1293  biotin/lipoyl attachment  31.97 
 
 
613 aa  58.9  0.00000003  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.352378  n/a   
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  45.45 
 
 
700 aa  58.5  0.00000004  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_128  oxaloacetate decarboxylase, alpha subunit  42.03 
 
 
587 aa  58.5  0.00000004  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0980  pyruvate carboxylase  42.19 
 
 
1147 aa  58.5  0.00000004  Geobacillus sp. WCH70  Bacteria  normal  0.125957  n/a   
 
 
-
 
NC_013411  GYMC61_1852  pyruvate carboxylase  42.19 
 
 
1147 aa  58.5  0.00000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_3513  pyruvate carboxylase  41.43 
 
 
1128 aa  58.5  0.00000004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3151  carbamoyl-phosphate synthase L chain ATP-binding  40 
 
 
657 aa  58.5  0.00000004  Caulobacter sp. K31  Bacteria  normal  normal  0.111688 
 
 
-
 
NC_009338  Mflv_4198  pyruvate carboxylase  50 
 
 
1148 aa  58.5  0.00000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.721945 
 
 
-
 
NC_010571  Oter_3309  biotin/lipoyl attachment domain-containing protein  46.15 
 
 
131 aa  58.2  0.00000005  Opitutus terrae PB90-1  Bacteria  normal  0.837513  normal 
 
 
-
 
NC_006274  BCZK3707  pyruvate carboxylase  40.51 
 
 
1148 aa  58.2  0.00000005  Bacillus cereus E33L  Bacteria  normal  0.863258  n/a   
 
 
-
 
NC_011898  Ccel_1737  biotin/lipoyl attachment domain-containing protein  46.48 
 
 
122 aa  58.2  0.00000005  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1350  pyruvate carboxylase subunit B  44.29 
 
 
568 aa  58.2  0.00000005  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2649  pyruvate carboxylase  40.51 
 
 
1148 aa  58.2  0.00000005  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00733169  n/a   
 
 
-
 
NC_011725  BCB4264_A4050  pyruvate carboxylase  40.51 
 
 
1148 aa  58.2  0.00000005  Bacillus cereus B4264  Bacteria  normal  0.898796  n/a   
 
 
-
 
NC_010816  BLD_1631  acetyl/propionyl-CoA carboxylase subunit alpha  42.25 
 
 
654 aa  58.2  0.00000005  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1190  pyruvate carboxylase  40.51 
 
 
1148 aa  57.8  0.00000006  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3962  pyruvate carboxylase  40.51 
 
 
1148 aa  58.2  0.00000006  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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