| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0119 |
|---|
| Symbol | oadA |
|---|
| ID | 3230530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 116845 |
|---|
| End bp | 118599 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637119687 |
|---|
| Product | pyruvate carboxylase subunit B |
|---|
| Protein accession | YP_180869 |
|---|
| Protein GI | 57235060 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
|---|
| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.698581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATAA AGATAACAGA TACCACTCTG CGGGATGCGC ACCAGTCACT GATAGCTACC
CGGATGCGTA CCCGTGACAT GATTGATATT GCCGCCAAGC TGGATAAGGT CGGCTTTTAT
TCACTGGAGG TCTGGGGCGG CGCTACCTTT GACTCCTGCA TCCGCTTCCT GAACGAAGAC
CCTTGGGAAC GCCTGCGCCT TATACGCCAG AAAGCTCCCA ATACCCCCCT CCAGATGCTT
CTCCGCGGGC AGAATCTGGT GGGATACTGT CACTATGCAG ATGATGTAGT GCGTGAGTTT
GTCCGTTTGT CCGTTAAAAA CGGCATAGAT ATTTTCCGGG TTTTTGATGC CCTGAATGAT
ACCCGCAATA TGGAAGTTTC CGTTCAGGCG GCCAAAGAAC TTAAGGCTCA CGTTCAGGGT
ACTATCTGCT ATACCACCAG CCCCATTCAC ACCGTAGAAA ATCTGGCCGA GATGGCAGTG
GAACTGGAAA AGATGGGCTG TGATTCTATC TGTATTAAAG ACATGGCCGG GCTTATTACC
CCCACCGCTG CCGCCCAGCT GGTAAAATCT ATAAAAGCCA AGGTCAAACT GCCGGTAGAC
CTCCACTCCC ACTGCACCAG CGGCATGGCA CCTCTGGCTT ATTATGCCGC GGCCGAGGCC
GGGGTGGATA TAATAGACAC CGCCTTCTCC GCCTTTGCCT GGGGTACGTC CCAGCCCACT
ACCGAAAGTT TCGTGGCCGC TTTTCAGGGT ACGAAACTGG ATACCGGGCT TAATCTGGAA
CTGATGAGCG AAATAGGTGA GGAGTTTAAT AAAATAAGCT CTACTTACCG CTGCCTTTAT
ACCTGCGAAG CCACCCAGCC GAGTATCGGG GTGCTTCTCC ACCAGATACC CGGCGGTATG
ATTTCAAATC TGGTCAGCCA GCTTCGCCAG CAGAATGCCT TTGACAAACT GCCGCAGGTA
CTGGCCGAAG TACCCAAAGT AAGGGCGGAT TTGGGCTACC CCCCGCTGGT TACCCCGTCA
AGCCAGATTG TAGGCACGCA GGCTATTTTA AATGTGCTGA GCGGTGCCCG CTACAAACAG
GTTACCAAAG AAACTAAAAA TTACCTGCTG GGGTATTACG GCAAAATACC CGGTGCGGTA
AATGAAGAAA TACGCAAAGC TATTATCGGT GATGAAAAAC CCATTAGTGT CAGGCCGGGG
GCTTTGCTTG AGCCGGAACT GCCCAAGATG AAGGCCGAAG GTGAAAAGCT GGGTATACTC
AAAACCGAAG AAGACCTTTT GACTTATGCC ATGTACCCTG AGGTAGCGGC CAAGTTCCTC
AAGGGTGAGT GCAAGGAAGA GTGCCTTTTG CCGTCCACCC CTGAAGCAGC CAAAGTTGAA
GCCAAAACCG AAGCTAAATC CGCTCCGGTC TTTAATGGTT CGGCTGAATA CAGCGTTGAG
GTAGACGGAG AAGTCTTTAC GGTCAAGGTT TCCGCTAAGG CCGGTGCGGT TGGCGAAGCC
CCCAAAGCTG CCAAGCCTAC GGCCTCACAC CCCGGGGCAG TTGTCTCCCC CATGCAGGGT
ATGCTCCTTT CCCTGAAGGT GAAGGAAGGG GACAAGGTTA GCGAAGGTGA AGTGGTGGCC
ACCATTGAGG CTATGAAGAT GGAAAACGAT GTTACCGCCG CTGTCAGCGG GGTAGTTTCA
GAGATATATG CTTATGAGGG CGAAGTGGTG GGCAGCAAAG ACGTAATTAT GGTGATTGAG
CCAGATGCTA AATAA
|
|---|
| Protein sequence | MGIKITDTTL RDAHQSLIAT RMRTRDMIDI AAKLDKVGFY SLEVWGGATF DSCIRFLNED
PWERLRLIRQ KAPNTPLQML LRGQNLVGYC HYADDVVREF VRLSVKNGID IFRVFDALND
TRNMEVSVQA AKELKAHVQG TICYTTSPIH TVENLAEMAV ELEKMGCDSI CIKDMAGLIT
PTAAAQLVKS IKAKVKLPVD LHSHCTSGMA PLAYYAAAEA GVDIIDTAFS AFAWGTSQPT
TESFVAAFQG TKLDTGLNLE LMSEIGEEFN KISSTYRCLY TCEATQPSIG VLLHQIPGGM
ISNLVSQLRQ QNAFDKLPQV LAEVPKVRAD LGYPPLVTPS SQIVGTQAIL NVLSGARYKQ
VTKETKNYLL GYYGKIPGAV NEEIRKAIIG DEKPISVRPG ALLEPELPKM KAEGEKLGIL
KTEEDLLTYA MYPEVAAKFL KGECKEECLL PSTPEAAKVE AKTEAKSAPV FNGSAEYSVE
VDGEVFTVKV SAKAGAVGEA PKAAKPTASH PGAVVSPMQG MLLSLKVKEG DKVSEGEVVA
TIEAMKMEND VTAAVSGVVS EIYAYEGEVV GSKDVIMVIE PDAK
|
|---|
| |