| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4478 |
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| Symbol | |
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| ID | 5107173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4907937 |
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| End bp | 4909745 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505749 |
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| Product | pyruvate carboxylase subunit B |
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| Protein accession | YP_001189957 |
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| Protein GI | 146309492 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AAGTTACCGT CACCGACACC ATCCTGCGCG ACGCCCACCA GTCGCTGCTG
GCGACCCGCA TGCGCACCGA GGACATGCTG CCGATCTGCG ACAAGCTCGA CCGCGTCGGC
TACTGGTCGC TGGAAGTCTG GGGCGGCGCC ACCTTCGACG CCTGCGTGCG CTTTCTCAAG
GAAGACCCCT GGGAGCGTCT GCGTCAGCTC AAGGCGGCGC TGCCCAACAC CCGTCTGCAG
ATGCTCCTGC GCGGGCAGAA CCTGCTCGGC TACCGCCACT ACAGCGATGA CGTGGTGCGC
GCCTTCGTGG CCAAGGCGGC GGTCAACGGC ATCGACGTGT TCCGCATCTT CGATGCGATG
AACGACGTGC GTAACCTGCG CGTGTCCATC GAGGCGGTGA AGGCCGCCGG CAAGCACGCC
CAGGGCACCA TCGCCTACAC CACCAGCCCG GTGCACACCA TCGACGCCTT CGTCGAGCAG
GCCAAGCAGA TGGCCGCCAT GGGGGTGGAT TCCATCGCCA TCAAGGACAT GGCCGGCCTG
CTCACCCCCT ACGCCACCGG CGATCTGGTC AGGGCGCTGA AAGACGCCCT GCCGCTGGAG
GTGGTGGTGC ACTCGCACGA CACCGCCGGC GTGGCCAGCA TGTGCCAGCT CAAGGCCGTG
GAAAACGGCG CCGACCGCAT CGACACCGCC ATCTCCAGCA TGGCCTGGGG CACCAGCCAT
CCGGGTACCG AATCCATGGT CGCGGCGCTG CGTGGCACGC CCTACGACAC CGGCCTGGAC
CTGGAACTGA TCCAGGAGAT CGGCCTGTAC TTCCACGCCG TGCGCAAGAA GTACCACCAG
TTCGAGAGCG AATTCACCGG CGTCGATACC CGCGTGCAGG TCAATCAGGT ACCGGGCGGG
ATGATTTCCA ACCTGGCCAA CCAGTTGAAG GAGCAGGGCG CCCTCAATCG CATGGGCGAA
GTGCTGGAAG AGATTCCGCG GGTGCGCGCC GACCTCGGCT ACCCGCCGCT GGTGACGCCC
ACTTCGCAGA TCGTCGGCAC CCAGGCCTTC TTCAACGTGC TCGCCGGCGA GCGCTACAAG
ACCATCACCA ACGAGGTGAA GCTGTACTTG CAAGGGCGTT ACGGCAAGGC GCCGGGCAAG
GTCAATGACG AGCTGCGCAA GCGTGCCATC GGTAACGAAG AAGTGATCGA AGGGCGCCCA
GCCGACCTGC TCAAGCCGGA GATGGCCAAG CTGCGCGAGG AGATCGGCAG CCTGGCCAAG
TCCGAAGAGG ACGTGCTGAC CTTCGCCATG TTCCCCGACA TCGGCCGCAA GTTCCTCGAG
GAGCGTGCCG CCGGCACCCT CAAGCCCGAG GCCCTGCTGC CCATGCCGCA GGCCGGCGGC
GCCGCGCCGG TGGGTGGTGA AGGCGTGCCC ACCGAGTTCG TGGTGGACGT GCATGGCGAG
AGCTACCGCG TCGACATCAC CGGTGTCGGC GTCAAGGGCG ATGGCAAGCG CCACTTCTAC
CTGTCCATCG ATGGCATGCC GGAAGAGGTG GTGTTCGAGC CGCTCAACGA GTTCGTCGCG
GGCTCCGGCG GCAAGCGCAA GCAGGCCAGC GCGCCGGGCG ACGTGTCCAC CACCATGCCG
GGCAACATCG TCGATGTACT GGTCAAGGAA GGTGATGCGG TCAGGGCCGG TCAGGCCGTG
CTGATCACCG AAGCGATGAA GATGGAAACC GAAGTGCAGG CGCCGATCGC CGGTACCGTC
AAGGCCGTTC ACGTGGCCAA GGGCGACCGC GTCAATCCGG GCGAAGTGCT GGTGGAAATC
GAAGGTTAA
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| Protein sequence | MSKKVTVTDT ILRDAHQSLL ATRMRTEDML PICDKLDRVG YWSLEVWGGA TFDACVRFLK
EDPWERLRQL KAALPNTRLQ MLLRGQNLLG YRHYSDDVVR AFVAKAAVNG IDVFRIFDAM
NDVRNLRVSI EAVKAAGKHA QGTIAYTTSP VHTIDAFVEQ AKQMAAMGVD SIAIKDMAGL
LTPYATGDLV RALKDALPLE VVVHSHDTAG VASMCQLKAV ENGADRIDTA ISSMAWGTSH
PGTESMVAAL RGTPYDTGLD LELIQEIGLY FHAVRKKYHQ FESEFTGVDT RVQVNQVPGG
MISNLANQLK EQGALNRMGE VLEEIPRVRA DLGYPPLVTP TSQIVGTQAF FNVLAGERYK
TITNEVKLYL QGRYGKAPGK VNDELRKRAI GNEEVIEGRP ADLLKPEMAK LREEIGSLAK
SEEDVLTFAM FPDIGRKFLE ERAAGTLKPE ALLPMPQAGG AAPVGGEGVP TEFVVDVHGE
SYRVDITGVG VKGDGKRHFY LSIDGMPEEV VFEPLNEFVA GSGGKRKQAS APGDVSTTMP
GNIVDVLVKE GDAVRAGQAV LITEAMKMET EVQAPIAGTV KAVHVAKGDR VNPGEVLVEI
EG
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