| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2163 |
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| Symbol | |
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| ID | 5196270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2424108 |
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| End bp | 2425979 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581708 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001262660 |
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| Protein GI | 148555078 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0578924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.656979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAGT CTCTCCTCAT CGCCAATCGC GGCGAGATCG CCCGCCGCAT CATCCGCACT
GCGCGGAAGA TGGGCATCCG CACCGTCGCG GTGCATTCGG ACGTCGACGC CGCCATGCCC
TTCGTGCGCG AGGCGGACGC GGCGGTGTGC ATCGGCTCCG CCCCGGCGCG CGAATCCTAT
CTGGTCCAGG CGAAGATCCT GGAGGCCGCG AAGGCGACCG GCGCCGAGGC GATCCACCCC
GGCTACGGCT TCCTCTCGGA AAATGCCGAG TTCGCCGAGG CGGTCGAGGC GGCCGGCCTC
GTCTGGGTCG GCGCGCCCGC CCATTCGATC CGCGCCATGG GCCTGAAGGA CGCCGCCAAG
AAGCTGATGG TCGCGGCCGG CGTGCCCGTC ACCCCCGGCT ATATGGGCGA AGACCAGGAC
CCCGCCCATC TGAAGGCCGA GGCCGATCGG ATCGGCTATC CGGTGCTGAT CAAGGCGGTC
GCCGGCGGCG GCGGCAAGGG CATGCGCAAG GTCGACGCGT CCGCCGACTT CGCCGACGCG
CTGCTGTCCT GCCAGCGCGA GGCGGCCTCC TCCTTCGGCG ACGACCGCGT GCTGATCGAA
AAGTACATCC TCGGTCCCCG GCACATCGAG GTGCAGGTGT TCGGCGACCG GCACGGCCAT
GTCGTCCACC TGTTCGAGCG CGACTGCTCG CTCCAGCGCC GCCACCAGAA GGTGATCGAG
GAGGCCCCCG CCCCCGGCAT GGACGCGGCC ACCCGCGCCG CCGTCTGCGA GGCGGCGGTC
AAGGCGGCCA AGGCGGTCGA CTATGTCGGC GCGGGCACGA TCGAGTTCAT CGCCGACGCC
TCCGAAGGGC TGCGCGCCGA CCGCATCTGG TTCATGGAGA TGAACACGCG GCTGCAGGTC
GAGCATCCGG TGACCGAGGC GATCACCGGC CAGGACCTGG TCGAATGGCA GCTTCGCGTC
GCGTCGGGCG AACCCCTGCC GAGGACGCAG GAGCAGCTCT CGATCAACGG CTGGGCGATG
GAGGCGCGGC TCTATGCCGA GAATCCGTCG AACGGCTTCC TGCCGTCGAC CGGCCCGCTC
ACCCGGCTGC GCCTGCCGCG CGGCATCCGC GTCGACAGCG GCGTCGAGGA GGGCGGCGAG
GTGTCGCCCT ATTACGATCC GATGATCGCC AAGCTGATCG TCGCGGCACC GAGCCGGCCG
GCGGCGGCGG CGAAGCTCGC CCAGGCGGCG GCGCGGGTCG AGGTCTGGCC GGTCCGCACC
AACGCCGCCT TCCTGGCGCG CGCGGCGGCC GATCCCGATT TCGTCGCCGG CCATGTCGAC
ACCGGCTTCA TCGAGCGCCA CGCCGACCGG CTCGTCCCTC CCGCCGAACC GTCGGCGGCG
GTACAGCAGG CCGCCGCCCG CGCGCTGCTG CCGACGGAAG CGACCGATGC CTGGACCAGC
CTGACCGGCT TCCGCGCCAA TGCCGCGCCC GAGCGGCGGA TCGAGGTCGA GGTGGCGGGG
CATAGCCATC TGGTCGCGCT CGACGACGGC GCGGCCGGCG GCAAGCTGCG CGCCGTGGGC
GGCGAGACGC TGCTGTTCCT CGACGGCGAG GCCTGGCCGG TCGAGGCGCC GCGCGCCGAC
CATGCCGGCG GCGGCGGGGC GGTGTCCGAC GGTGCGCTGC TCGCGCCGAT GCCGGGAAAG
GTGATCGCGG TCGAGGTCGC CGAGGGCGAC GCCGTGACCA AGGGCCAGAA GCTGCTGGTG
CTCGAGGCGA TGAAGATGGA GCAGGCGATG CTCGCCCCGT TCGACGGCAT CGTCGCCGAG
CTCAAGGCCA GCGTCGGCGG CCAGGTGAGC GAAGGCGCCA TGCTCGCCCG GGTGGAGAAG
GCGGAGGACT GA
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| Protein sequence | MIKSLLIANR GEIARRIIRT ARKMGIRTVA VHSDVDAAMP FVREADAAVC IGSAPARESY
LVQAKILEAA KATGAEAIHP GYGFLSENAE FAEAVEAAGL VWVGAPAHSI RAMGLKDAAK
KLMVAAGVPV TPGYMGEDQD PAHLKAEADR IGYPVLIKAV AGGGGKGMRK VDASADFADA
LLSCQREAAS SFGDDRVLIE KYILGPRHIE VQVFGDRHGH VVHLFERDCS LQRRHQKVIE
EAPAPGMDAA TRAAVCEAAV KAAKAVDYVG AGTIEFIADA SEGLRADRIW FMEMNTRLQV
EHPVTEAITG QDLVEWQLRV ASGEPLPRTQ EQLSINGWAM EARLYAENPS NGFLPSTGPL
TRLRLPRGIR VDSGVEEGGE VSPYYDPMIA KLIVAAPSRP AAAAKLAQAA ARVEVWPVRT
NAAFLARAAA DPDFVAGHVD TGFIERHADR LVPPAEPSAA VQQAAARALL PTEATDAWTS
LTGFRANAAP ERRIEVEVAG HSHLVALDDG AAGGKLRAVG GETLLFLDGE AWPVEAPRAD
HAGGGGAVSD GALLAPMPGK VIAVEVAEGD AVTKGQKLLV LEAMKMEQAM LAPFDGIVAE
LKASVGGQVS EGAMLARVEK AED
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