Gene Slin_4454 details

Gene Information

• Locus tag: Slin_4454
• ID: 8728214
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 5395689
• End bp: 5399138
• Gene Length: 3450 bp
• Protein Length: 1149 aa
• Translation table: 11
• GC content: 53%
• Product: pyruvate carboxylase
• Protein accession: YP_003389234
• Protein GI: 284039304

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGAGT ACATCCGACC CATTAAACGT TTGCTCGTCG CCAACCGGGG CGAAATCGCT 
ATCCGCATCA TGCGGGCCGC TACTGAGCTG GGCATCACAA CCGTTGCCGT TTACACCTAC 
GAAGACCGGT ATTCGCTTCA CCGCTATAAG GCCGATGAAG CCTACCAGAT TGGGCGTGAT 
GAAGACCCGC TGAAACCGTA TCTGGACGTT GAAGGGATTG TTCTCCTTGC CAAACGACAT 
AAGGTTGATG CTATTCACCC TGGCTACGGA TTCCTGTCAG AAAACGTAAA ACTGGCCCGT 
CGGTGCCGCG AAGAAGGTAT CATTTTCGTA GGGCCATCGC CGGAAGCTAT GGATGCGCTG 
GGCGATAAAG TACGTGCCAA AAATCTGGCG ACCAGTGCCG GTGTCCCTCT CATTCCCGAT 
TCGCGGGAGG AGAATATGTC GCCGGAGTTC GCCCTAACCG AAGCGCAACG CATTGGCTTC 
CCCATCATGG TGAAAGCCGC TGCTGGGGGT GGTGGACGCG GTATGCGCGT GGTACGACAG 
GCCGAAGACT TTGAAAAAGC CTTTGCCGAA GCCAAAAACG AAGCCCGCAA TGCCTTTGGC 
GACGATACCA TCTTCCTCGA AAAATTCATC GAAGAACCCA AGCATATTGA GGTTCAACTA 
CTCGGCGATC AGCACGGCAA CATCGTTCAC CTGTACGAAC GCGACTGCTC CGTACAACGA 
CGGTTTCAGA AGGTGGTTGA AGTTGCTCCA TCCTTTGGGT TAAAGCAGGA AACGAAAGAT 
AAACTCTACG CCTACGCCCT GCAATTGGGT CGGGCGGTGA ACTACTCCAA TGCTGGTACG 
GTCGAATTCC TGGTCGACAA AGCCGAAAAT ATCTATTTCA TTGAGGTTAA CCCCCGTATT 
CAGGTTGAGC ATACCATTAC GGAGGAGGTA ACGGGCATCG ACATTGTCAG AACGCAGATT 
CTGATTGCGA TGGGTTACCA GCTTTCCGAC AACGGAATTT ATATCAATCA TCAGGACGAC 
GTTCCGCTCA ACGGCTACGC TATTCAGTGC CGGATCACGA CCGAAGACCC TGCCAATGGG 
TTCAAGCCTG ATTTTGGTAC GATAACGGCC TATCGGAACG CGGCCGGTTT CGGTATCCGT 
CTCGATGAAG GAAGCAGCTA TGCCGGGATG AAAATCTCCC CCTACTTCGA TTCCATGATC 
GTGAAAGTAT CGGCGCGGGG GCGGACACTC AAGGGAGCTA CCCAGCGACT GACGCGGGCA 
CTGGTCGAGT TCCGAATCCG GGGCGTTAAA ACCAACATCG GCTTTCTGCT GAATGTGATC 
AGTCACCCGG TTTTCCAGCG GGGCGAAGCG CGGGTATCAT TTATTGAAAC CCACCCCGAA 
CTGTTCAATT TTCGCAAGCC ACAAGACCGT TCGACGCGGG TACTTAACTA CCTGGCCGAT 
GTGATTGTAA ACGGAAATCC GGAAGTTAAA AAGAAGGATG ACAGTAAGGT ATTCCGCACA 
CCCGTAGTTC CCAACTTCGA TATCTACGGG ACTTACCCGG CCGGAAATCG TGACCGGCTC 
AAAGAGTTAG GCCGGGAGAA ATTCGTTCAG TGGGTGCTCG ACCAGAAAAG CATTCTGTAT 
ACCGATACTA CGTTTCGCGA TGGACACCAG TCGCTACTGG CAACCCGCGT ACGGACGCAG 
GATTTGCAGA AGGTAGCCGA AGGGTTTGCC AAGAATCACC CGGAGCTGTT TTCTATGGAA 
GTCTGGGGTG GCGCTACCTT CGACGTATCG ATGCGCTTCC TGTATGAAAG TCCATGGAAA 
CGGCTGGCCG CCCTGCGCGA AGCCATGCCG AATATGCTCC TGCAAATGCT GTTCCGGGGT 
TCCAACGCCG TTGGGTACTC GGCCTATCCC GACAACCTGA TCGAGAAGTT TGTGGAGCAG 
TCGTGGGAAA CGGGTATTGA CGTTTTCCGG ATTTTCGACT CGCTCAACTG GGTCGAAGCC 
ATGAAAGTGA GTATGCGGGC CGTCCGCGAA CGGACCGATG CACTGTGCGA AGCGGCCATC 
TGTTACACCG GCGATCTGCT GGACCCGAAT CAGAAGAAAT ACACGCTCCA GTACTACCTG 
GACATGGCGC GTCAGCTGGA AGACGAAGGC GCTCACCTGC TGGCTATCAA AGACATGGCC 
GGTTTGCTCA AGCCTCTGGC CGCCGATGTG CTCGTTCGAG AGCTGAAGCA GGTCGTTAGC 
ATTCCGGTTC ACCTCCATAC GCACGACACC CCTGGCATTC AGGCGGCTTC GTATCTGAAA 
GCCATTGATG CCGGTGTCGA TATTGTCGAT TGTGCCCTTG GGGCGCTGTC GGGCCTGACC 
TCACAGCCGA ATTTCAACTC CGTTGTGGCC ATGATGCAGG GTCACGAGCG GGAGTGCAAA 
ACGGATCTTT CCTCGTTAAA TGCCTACTCG AACTACTGGG AAGATGTTCG GGAGTACTAC 
TACCCGTTTG AGTCGGGCAT GAAGGCGGGC AGTGCGGAAG TGTACGAAAA CGAAATTCCG 
GGCGGCCAGT ATTCGAACCT GAAGCCACAA GCCATCGCTA CCGGCCTGGG CGATAAGTTC 
GAGACCCTGA AAAAGAACTA CTCGGTAGCG AACCAACTCT TTGGCGACAT CGTGAAAGTA 
ACACCGTCCT CCAAGGTGGT GGGCGACATG GCTATTTTCA TGACCGCCAA TAACCTTACG 
GCTAACGACG TGCTGACGCG TGGCGATTCA TTGTCGTTCC CGGAGTCGGT GAAAGAGCTG 
ATGAAGGGAA TCCTGGGTCA GCCCGTTGGT GGTTTCCCGG AGGATATTCA GAAGGTAGTG 
TTGAAAGGGG AGGAGCCCAT CAAAGGCCGC CCAAACGAGC ACCTGAAACC CATCGATTTC 
GATGCGGACT TTAAAGTCTT TCAGGAGAAA TACCCGCAGA GTGATGGGTT TGTCGATTAC 
CTCTCGTACC AGATGTACCC AAAGGTATAT GACGAATACT ACAAGGCTAA TGTACAGTAC 
GGCAACGTCA GCATTATCCC GACGCCCGCG TTCTTTTATG GATTGAAAGA GAACGAAGAG 
ATTCTGATCA ACATCGAAGA AGGGAAGAAT ATCCTGGTTC GGTTGTTGTT CAAATCGGAA 
CCCGACGAAT TTGGTATGCG GACCATCACC TTCGAACTCA ATGGCCAAAG CCGTCAGGTT 
CAGGTACGTG ACCGGGCCTC GAAGGTTGAA AAAGCCATCA ATGCCAAAGC GAGCAAGCCG 
GGCGATGTTG GTGCCCCGCT GCAAGGACGC TTAACCCGAA TTCTGGTGAA GGAAGGCGAT 
GTTGTCAAGA AAAACCAGCC TTTGTTCGTG ATCGAAGCCA TGAAAATGGA AAGCATCGTG 
GCTGCCCAGA AAGAGGGTAA AGTAGCCAAA GTTGTGCTCA AAGAGGCTAC GACCGTTGAG 
CAGGACGATT GCGTCATTGA GTTAGCGTAA 

 

Protein sequence

MKEYIRPIKR LLVANRGEIA IRIMRAATEL GITTVAVYTY EDRYSLHRYK ADEAYQIGRD 
EDPLKPYLDV EGIVLLAKRH KVDAIHPGYG FLSENVKLAR RCREEGIIFV GPSPEAMDAL 
GDKVRAKNLA TSAGVPLIPD SREENMSPEF ALTEAQRIGF PIMVKAAAGG GGRGMRVVRQ 
AEDFEKAFAE AKNEARNAFG DDTIFLEKFI EEPKHIEVQL LGDQHGNIVH LYERDCSVQR 
RFQKVVEVAP SFGLKQETKD KLYAYALQLG RAVNYSNAGT VEFLVDKAEN IYFIEVNPRI 
QVEHTITEEV TGIDIVRTQI LIAMGYQLSD NGIYINHQDD VPLNGYAIQC RITTEDPANG 
FKPDFGTITA YRNAAGFGIR LDEGSSYAGM KISPYFDSMI VKVSARGRTL KGATQRLTRA 
LVEFRIRGVK TNIGFLLNVI SHPVFQRGEA RVSFIETHPE LFNFRKPQDR STRVLNYLAD 
VIVNGNPEVK KKDDSKVFRT PVVPNFDIYG TYPAGNRDRL KELGREKFVQ WVLDQKSILY 
TDTTFRDGHQ SLLATRVRTQ DLQKVAEGFA KNHPELFSME VWGGATFDVS MRFLYESPWK 
RLAALREAMP NMLLQMLFRG SNAVGYSAYP DNLIEKFVEQ SWETGIDVFR IFDSLNWVEA 
MKVSMRAVRE RTDALCEAAI CYTGDLLDPN QKKYTLQYYL DMARQLEDEG AHLLAIKDMA 
GLLKPLAADV LVRELKQVVS IPVHLHTHDT PGIQAASYLK AIDAGVDIVD CALGALSGLT 
SQPNFNSVVA MMQGHERECK TDLSSLNAYS NYWEDVREYY YPFESGMKAG SAEVYENEIP 
GGQYSNLKPQ AIATGLGDKF ETLKKNYSVA NQLFGDIVKV TPSSKVVGDM AIFMTANNLT 
ANDVLTRGDS LSFPESVKEL MKGILGQPVG GFPEDIQKVV LKGEEPIKGR PNEHLKPIDF 
DADFKVFQEK YPQSDGFVDY LSYQMYPKVY DEYYKANVQY GNVSIIPTPA FFYGLKENEE 
ILINIEEGKN ILVRLLFKSE PDEFGMRTIT FELNGQSRQV QVRDRASKVE KAINAKASKP 
GDVGAPLQGR LTRILVKEGD VVKKNQPLFV IEAMKMESIV AAQKEGKVAK VVLKEATTVE 
QDDCVIELA