| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3200 |
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| Symbol | |
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| ID | 3971998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3541578 |
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| End bp | 3543572 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926310 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_533061 |
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| Protein GI | 90424691 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0237038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.361734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG CTCCCGCTTT GCAGTTGACG CCGTTCTCCA GCATTCTGAT CGCCAACCGC
GGTGAGATCG CGCTGCGCAT CATGCGCACC GCGCGAAAAC TCGGCTATGC GGTGGTCGCG
GTGTATTCCG ACGCCGACGC CGACGCGTTG CACGTCCGTG CCGCCGATGC GGCGGTCCGT
ATCGGCGGCG CGTTGCCGCA GCAATCCTAT CTGAACATCG AAGCGATCAT CGCCGCGGCG
AAGCAGAGCG GCGCCGATGC GGTGCATCCC GGCTACGGCT TCCTCGCCGA AAACCAGGAC
TTCGCCGCGG CCTGCCGCGA CGCCGGCCTG CTGTTCATCG GGCCCTCGGC GGCGTCGATC
GCGGCGATGG CCAACAAGGC GGGGGCCAAG GCGATCATGC GCAAGGCCGG CGTGCCGTGC
GTGCCGGGCT ATCAGGGCGC CGATCAGAGC GACGAAGCGA TGGCGCGTGA GGCGGCTTCG
ATCGGCTTTC CGGTGATGAT CAAGGCGGTC GCCGGCGGCG GCGGTCGCGG CATGCGGCTG
GTCGAAGATG CCGCGGCGTT TGCCGAAGCG TTGCGCGGCG CGCGGTCGGA GGCGCAGGGC
GGGTTCGGCG ATCCCACGGT GATCCTGGAG CGCGCGATCG TGAATCCGCG GCACATCGAG
ATTCAGGTGT TCGGCGATCG CTACGGCCAC GCCGTCCATC TCGGCGAGCG CGACTGCTCG
GTGCAGCGCC GGCACCAGAA GCTGATCGAG GAGGCGCCGT CTCCCGCGGT GTCGCAGGCG
TTGCGCGAGG AGATGGGCAC GGTCGCCGTC AACGCGGCGA AGGCGATCGG CTACGAGGGC
GCCGGCACGC TGGAATTCCT GCTCGATGGC GATGGGCGGT TCTATTTTAT GGAGATGAAT
ACGCGGCTGC AGGTCGAGCA TCCGGTCACC GAGGCGATCA CCGGGCTCGA TCTGGTGGAG
CTGCAATTGC GGATCGCCGC CGGCGAGCCG CTGCCGTTGC AGCAGGACGA TGTCCAGTTC
CGCGGCCACG CCATCGAGGT GCGGCTGTGT TCGGAAGACC CCGCGCAGGA TTTCATGCCG
CAATCCGGCA GGCTCGCGCT GTGGCAGATG CCGGGCGAAT TGCGGGTCGA GCACGCGCTG
CAGTCGGGCT CGGCGATTTC GCCATATTAC GATTCGATGA TCGCCAAGAT CGTCGCCCAC
GGCGACAGCC GCGACGAAGC GCGGCGAAAA CTGCTGCACG GCCTCGCGCG GACCGTCGCG
TTCGGCGTCT CCACGAATTG CAGCTTCCTC GCCGCCTGTC TGCGGCATCC TTCGTTTGCG
GCCGGCGCGG CGACCACCGG GTTCATCGCC CAGCATCGCG ATGCGTTGTT GGCGCCCGAG
CCGGACCACG ATGTGCCGGC CGCCGCTGTG GCGGCGCTGT TGCTGTACGT CACCGATCGC
CACGCGCCGC GCTGGCGCAA GGGCCGCTCG TTGGCGGCGA CGTTCCCGTG CCCGCTGCGG
ATCGAGATCG ACGGCATCAC CCTCGAGCCC GAGGTGACGC GCGAGCGCGA CGGCTGCACC
ATCGTGCGCA TCGGCGGCAA CGCCGTGCGC TTCGCGCTCG ACGAGCTGAG CGGCGACACC
TTGCGCTTCC GTGCCGATGG GATGTCGGAA TCCATCGTCT ATCACCGCGA CGGCGACGCG
CTGTTTGTGC TGCGGCAGGG CGTCACGTCT GCGGTCCGCG ACCTGACCCG CGCCGCGCCG
GCGCGCGCCG CCGCGGCCGG CGGCGACGGG CGGCTGCGCG CGGCGATGAA CGGCCGCGTC
GTCGCGGTGC TGGTCAAGCC CGGCGACCAG GTCGAGGCCG GGCAGCCGGT GCTGACGCTG
GAAGCGATGA AGATGGAGCA CGTGCACGCC GCTCCGATTT CGGGCATCGT TTCGGCGATC
GATGTCGAGG AAGGCGAGCA GGTCACAACC GGCCGCATCG TCGCCGAGAT CGAGGCGATG
TCGCAACAAG CGTAA
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| Protein sequence | MSVAPALQLT PFSSILIANR GEIALRIMRT ARKLGYAVVA VYSDADADAL HVRAADAAVR
IGGALPQQSY LNIEAIIAAA KQSGADAVHP GYGFLAENQD FAAACRDAGL LFIGPSAASI
AAMANKAGAK AIMRKAGVPC VPGYQGADQS DEAMAREAAS IGFPVMIKAV AGGGGRGMRL
VEDAAAFAEA LRGARSEAQG GFGDPTVILE RAIVNPRHIE IQVFGDRYGH AVHLGERDCS
VQRRHQKLIE EAPSPAVSQA LREEMGTVAV NAAKAIGYEG AGTLEFLLDG DGRFYFMEMN
TRLQVEHPVT EAITGLDLVE LQLRIAAGEP LPLQQDDVQF RGHAIEVRLC SEDPAQDFMP
QSGRLALWQM PGELRVEHAL QSGSAISPYY DSMIAKIVAH GDSRDEARRK LLHGLARTVA
FGVSTNCSFL AACLRHPSFA AGAATTGFIA QHRDALLAPE PDHDVPAAAV AALLLYVTDR
HAPRWRKGRS LAATFPCPLR IEIDGITLEP EVTRERDGCT IVRIGGNAVR FALDELSGDT
LRFRADGMSE SIVYHRDGDA LFVLRQGVTS AVRDLTRAAP ARAAAAGGDG RLRAAMNGRV
VAVLVKPGDQ VEAGQPVLTL EAMKMEHVHA APISGIVSAI DVEEGEQVTT GRIVAEIEAM
SQQA
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