Gene Phep_4063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4063 
Symbol 
ID8255197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4906681 
End bp4907178 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content44% 
IMG OID644937727 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_003094316 
Protein GI255533944 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA AAGTAAATGA TCATTACGAT TTTGATATCG AGCTTGCTCC TAAAGAGTTT 
AAAGCCAATG GCCAGGTCAT AGCGCTTGAT CCTGCAAAAA TATCCGAGAA CTATGTGCAT
GTCATTTATC AGAACAGGTC GTACAATATA GAACTGGTTT CAGCAGATAG GGCAGAAAAG
AGCAGCGTGA TTAAGGTAAA CGGTGCATTA TACCATATTG CTATACAGGA CGAGTATGCC
CCCTTGCTTA AGCAGCTCGG TTTAGATACG GCTATGGCTG GTAAAGTACA GGATGTTAAA
GCCCCCATGC CCGGCCTGGT GCTGAATGTA ATGGTTGAAG AAGGCCAGGA AGTAAATAAA
GGGGATAACC TGCTGGTACT GGAAGCCATG AAGATGGAAA ATATCATTAA ATCGCCGGCC
GGTGGTACAG TGAAGAAGGT ACTGACCAGT AAAGGGGTTA AAGTGGAAAA GAACGAAGTC
CTGATCCGGT TTTCGTAG
 
Protein sequence
MKVKVNDHYD FDIELAPKEF KANGQVIALD PAKISENYVH VIYQNRSYNI ELVSADRAEK 
SSVIKVNGAL YHIAIQDEYA PLLKQLGLDT AMAGKVQDVK APMPGLVLNV MVEEGQEVNK
GDNLLVLEAM KMENIIKSPA GGTVKKVLTS KGVKVEKNEV LIRFS