| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4719 |
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| Symbol | |
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| ID | 7971729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5012707 |
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| End bp | 5014710 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795304 |
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| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_002946590 |
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| Protein GI | 239817680 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAGA AGATCCTCAT TGCCAACCGA GGCGAGATCG CCTGCCGTGT CGCGGCCACT
GCCCGCCGCA TGGCGATTCG CACCGTGGCC GTGTACTCCG ATGCCGACGC GCATGCCAAC
CACGTGCGCG CCTGCGACGA GTCGGTGCAC CTCGGCGGCA GCGCACCGAA AGACAGCTAC
CTGCGCTGGG AAAAGATCCT CGAAGCCGCC AAGGCCACGG GCGCCGAAGC CGTGCATCCC
GGCTACGGCT TCCTGAGCGA GAACGAGGAG TTCGCACAGG CCTGCGCCGA CGCGGGCCTG
GTCTTCATCG GCCCGCCGCC TTCGGCCATC AAGGCGATGG GCCTGAAGGC CGAGTCGAAG
CAGCTGATGG AAAAGGCCGG CGTGCCGCTG GTGCCCGGCT ACCACGGCCA CGACCAGGGC
CCGGCGCTGC TGCAGCGCGA GGCCGACCGC ATCGGCTACC CGGTGCTCAT CAAGGCCAGT
GCGGGCGGCG GCGGCAAGGG CATGCGCGCG GTCGACAAGG CGGAAGACTT TGCCGCGGCG
CTCGCCTCGT GCCAGCGCGA GGCGATCAAC AGCTTCGGCG ACGACGCGGT GCTGATCGAG
AAGTACGTGC AGCGGCCGCG CCACATCGAG ATCCAGGTGT TCGGCGACAC GCACGGCAAC
TACGTCTACC TGTTCGAGCG CGACTGCTCG GTGCAGCGGC GGCACCAGAA GGTGCTGGAA
GAGGCGCCCG CGCCCGGCAT GACCGAGGCG ATGCGCAAGC AGATGGGCGA GGCGGCCGTG
GCGGCAGCGC GTGCGGTGAA CTACGTCGGC GCCGGCACGG TGGAATTCAT CGTCGAGCAG
CGCGAAGGCG GCGAGATGAA TTTCTTCTTC ATGGAGATGA ATACCCGCCT GCAGGTGGAG
CATCCGGTGA CCGAAGCGAT CACCGGCCTC GACCTCGTCG AATGGCAACT GCGCGTGGCC
TCGGGCGAGG CGCTGCCCGC AAAGCAGCAG GAGCTGCAGA TCCACGGCCA CGCGATCGAG
GCGCGCATCT GCGCCGAGAA CCCCGACAAC AACTTCCTGC CTGCGACAGG CAGCTTGCGC
GTCTACCGCA AGCCGCAAGC GACGGCCTTC CAGCGCAGCC GCGTGCGCAT CGACGACGGC
GTGCGCGAGG GCGGCGAGAT CTCTCCGTTC TACGACTCGA TGATCGCCAA GCTGATCGTG
CACGGCAGCA CGCGCGACGA GGCGCTGGCG CGGCTCGACG CGGCACTCGC GCAGGTGCAG
ATCGTCGGTG TGTCGACCAA TGTTCAGTTC CTGCGCGGCA TTCTCGCGAC CGAGTCGTTC
GCCAAGGCCA ACCTCGACAC CGCGCTGATC GAGCGCGAGC GCGCCGTGCT GTTCGACCGC
GAGGCGCTGG GCCTGCCGCT GGCCGCCGCC GCCGCCATCA CGCGCACGCT GGTCACCGAG
CGGCCGGTGG GCGCGCACTA CCCTTTCGAG CGGCGCGACG GCTGGCGCTC GCATGGCGAG
TACCGGCGCC ACTTCGACTT CGAATTCCGT GGTGCCGAGC AGACGGCCGT GCTGAGCTAC
AGGCGCGACG GCAGCCTGTG GCTCGAAGCC GGCGGCGTTG AAGGCCCGCT GGTCGTGGGC
CAGTTCCCGA CGGGCGAGTT CGAGGTCGAG TTTGCCGGTA TGCGGCAGAC CGTGGACGTG
CACCTGGACG GCGCCACGGC CCATGTGTTC GCGTCGAAGG GCGCCACGAA GATCACGGCC
ATCGACCGCC TGGCCCATGC CGGCGACACC CATGCCGAAG CCGGCCGCCT CACCGCGCCG
ATGCCCGGCA AGGTCGTGTC CTTCGCGGTC AAGGCCGGCG ACAAGGTCAG CCGCGGCCAG
CCGCTCGCGG TGATGGAGGC CATGAAGATG GAGCACACCA TCGCGGCGCC GGCCGACGGC
ACGGTGGAAG AACTGATGTT CTCGCCCGGC GAGCAGGTGG CCGAGGGCGA CGAGCTGCTG
CGGATGGCTG CGGCGGCGGT TTAA
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| Protein sequence | MFKKILIANR GEIACRVAAT ARRMAIRTVA VYSDADAHAN HVRACDESVH LGGSAPKDSY
LRWEKILEAA KATGAEAVHP GYGFLSENEE FAQACADAGL VFIGPPPSAI KAMGLKAESK
QLMEKAGVPL VPGYHGHDQG PALLQREADR IGYPVLIKAS AGGGGKGMRA VDKAEDFAAA
LASCQREAIN SFGDDAVLIE KYVQRPRHIE IQVFGDTHGN YVYLFERDCS VQRRHQKVLE
EAPAPGMTEA MRKQMGEAAV AAARAVNYVG AGTVEFIVEQ REGGEMNFFF MEMNTRLQVE
HPVTEAITGL DLVEWQLRVA SGEALPAKQQ ELQIHGHAIE ARICAENPDN NFLPATGSLR
VYRKPQATAF QRSRVRIDDG VREGGEISPF YDSMIAKLIV HGSTRDEALA RLDAALAQVQ
IVGVSTNVQF LRGILATESF AKANLDTALI ERERAVLFDR EALGLPLAAA AAITRTLVTE
RPVGAHYPFE RRDGWRSHGE YRRHFDFEFR GAEQTAVLSY RRDGSLWLEA GGVEGPLVVG
QFPTGEFEVE FAGMRQTVDV HLDGATAHVF ASKGATKITA IDRLAHAGDT HAEAGRLTAP
MPGKVVSFAV KAGDKVSRGQ PLAVMEAMKM EHTIAAPADG TVEELMFSPG EQVAEGDELL
RMAAAAV
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