Gene Caul_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1876 
Symbol 
ID5899331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2013260 
End bp2015125 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content69% 
IMG OID641562366 
Productcarbamoyl-phosphate synthase L chain ATP-binding 
Protein accessionYP_001683503 
Protein GI167645840 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGT CCGTGCTCAT CGCCAACCGC GGCGAAATCG CCTGTCGCAT CATCAAGACC 
GCCAAGAGGC TCGGCGTGCG CACTGTCGCC GTCTATTCCG ACGCGGACGT CGCGGCCTTG
CATGTCCGGC TGGCCGACGA GGCGGTGCAC ATTGGTCCGT CACCGGCTCG GGAATCCTAC
CTGCTGGGCC AGCGCATCAT CGCCGCCGCC AAAGCCACCG GCGCCGAGGC CATCCATCCA
GGTTATGGCT TCCTGTCGGA GAACGCCGAC TTCGCCGACG CCGTGACGTC GGCGGGCCTG
GTCTGGGTCG GGGCGCCTGC GTCGTCGATC CGCGCCATGG GGCTGAAGGA TTCGGCCAAG
GCGCTGATGA TCGCCGCGGG CGTGCCCGTC ACCCCCGGCT ATATGGGCGA CAATCAGGAT
CCCGATCACT TGAAGACCCA GGCCGACGCC ATCGGCTATC CCGTGCTGAT CAAGGCCGTC
GCGGGCGGCG GCGGCAAGGG CATGCGCAAG GTCGAAGCCT CGGCCGACTT CCTCGACCTG
CTCGCCTCGT GCCGGCGAGA AGCGGCGTCT TCGTTCGGCG ACGATCGGGT CCTGATCGAG
AAATACATCC TGTCGCCGCG GCATATCGAG GTTCAGGTCT TCGGTGACGC GCACGGCGAC
GTCGTGCACC TGTTCGAACG CGACTGCTCG CTGCAGCGCC GCCATCAGAA GGTGATCGAA
GAAGCCCCGG CTCCCGGCAT GACGCAAGAG GTGCGTGAGG CGGTGTGCGC CGCCGCCGTC
AAGGCCGCGA AGGCTGTCGA CTATGTCGGC GCCGGCACGA TCGAATTTAT CGCCGACGCT
TCGGAAGGCC TGAGAGCCGA CCGTATCTGG TTCATGGAAA TGAACACGCG GCTGCAGGTC
GAGCATCCGG TGACCGAAGC GATCACCGGC CAGGATCTGG TCGAATGGCA ACTGCGCGTC
GCCTCGGGGG AGCGCCTGCC CAAGCGCCAG GATGAAATCG GGATCGACGG ATGGGCCATG
GAGGCGCGCC TCTACGCCGA GAATCCCACC GCCGGCTTCC TGCCGTCCAC CGGCCCGCTG
GACAGACTGC GGCTGCCCGA TGACGTGCGC GTCGACACCG GCGTCTACGA GGGCGGCGAG
GTCACGCCCT TCTACGACCC GATGATCGCC AAACTGATCG TCCATGCGCC CACGCGCCAG
GCCGCCGCCG CGAAACTGGC CGCCGCCGCC CGTCAGGTCC AGGTCTGGCC CGTTCGCACC
AACGCCGCCT TCCTGGCCCG TGCGGCCGCC GATGGTGACT TCGTGGCCGG CAGGGTGGAC
ACCGGCTTCA TCGAATGCGG CATTGACGCC CTGGTCCCCT CGGCCGAGCC CTCCGCCGCC
GTCCAGGCGG CCGCCGCCTG GGCCCTGGTG TCCGCGCCCA CAGGTCGCGT CTGGACGGAC
CTGCCGGGGT TTCGGGCCAA CGCCCCGGCG CAACGCCAGA TCGCCGTCTC CATCGCCGGC
TCCATCCATT TGACCGAAGC CGCGCCGAGC GCCGAGGGGT GCATCGCTTC GGTCGGCGGG
CGCGACATCC TGTTTCTCGA AGGCGAGGCC TGGCCGTTCG GCCCGGGCCG CGTGGACGCT
CTTGGCGGAG GGAGCGTCTC CGACGGCGCG ATCCTCAGTC CCATGCCCGG AAGGGTCATC
GCGGTCGATG TCGACGAGGG CCAGGCGGTC ACGCGCGGCC AGAAGCTCCT GACGCTCGAG
GCCATGAAGA TGGAGCACGG CATGGTCGCT CCGTTCGACG GCGTGGTCAG GGCGCTGGCG
GTCAGGGCTG GCGATCAGGT GGGGGAGGGC GCGCTTCTCG CCCGCATCGA GATGAAGGCG
GACTGA
 
Protein sequence
MIQSVLIANR GEIACRIIKT AKRLGVRTVA VYSDADVAAL HVRLADEAVH IGPSPARESY 
LLGQRIIAAA KATGAEAIHP GYGFLSENAD FADAVTSAGL VWVGAPASSI RAMGLKDSAK
ALMIAAGVPV TPGYMGDNQD PDHLKTQADA IGYPVLIKAV AGGGGKGMRK VEASADFLDL
LASCRREAAS SFGDDRVLIE KYILSPRHIE VQVFGDAHGD VVHLFERDCS LQRRHQKVIE
EAPAPGMTQE VREAVCAAAV KAAKAVDYVG AGTIEFIADA SEGLRADRIW FMEMNTRLQV
EHPVTEAITG QDLVEWQLRV ASGERLPKRQ DEIGIDGWAM EARLYAENPT AGFLPSTGPL
DRLRLPDDVR VDTGVYEGGE VTPFYDPMIA KLIVHAPTRQ AAAAKLAAAA RQVQVWPVRT
NAAFLARAAA DGDFVAGRVD TGFIECGIDA LVPSAEPSAA VQAAAAWALV SAPTGRVWTD
LPGFRANAPA QRQIAVSIAG SIHLTEAAPS AEGCIASVGG RDILFLEGEA WPFGPGRVDA
LGGGSVSDGA ILSPMPGRVI AVDVDEGQAV TRGQKLLTLE AMKMEHGMVA PFDGVVRALA
VRAGDQVGEG ALLARIEMKA D