| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2116 |
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| Symbol | |
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| ID | 6162023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2312366 |
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| End bp | 2314444 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664885 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001791148 |
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| Protein GI | 171058799 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.278717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA AGATCCTGAT CGCCAACCGC GGCGAAATCG CCTGCCGCGT GGCCACCACC
GCGCGCCGCC TGGGCGTGCA GACCGTCGCC GTCTACTCCG ATGCCGACGC CCGCGCGCAG
CATGTGATGA CCTGCGACGA GGCGGTGCAC ATCGGCGCAT CCGCAGCGAA AGACAGCTAC
CTGCAATGGC AGCGCATCCT CGACGCCGCC AAGGCGACCG GTGCGCAGGC GGTGCACCCG
GGCTACGGTT TCCTGAGCGA AAACGAGGAC TTCGCGCGCG CCTGCGCCGA TGCCGGCCTG
GTCTTCATCG GCCCGCCGGT GGCGGCGATC GCGGCGATGG GCAGCAAGTC CGCCGCCAAG
TCGCTGATGG AGCAGGCCGG CGTGCCGCTG GTGCCGGGTT ATCACGGCGA CAACAACGAG
CCCGAGTTCC TACTGGCGCA AGCCGAGCGC ATCGGCTTTC CGGTGCTGAT CAAGGCCAGC
GCGGGTGGCG GCGGGCGTGG CATGCGGCGA GTCGACCGGG CCGAGGATTT TCTGGCCTCG
CTGGCCTCGT GCCAGCGCGA GGCGTCGGCC AGCTTCGGCA ACGATCACGT GCTGGTCGAG
CGTTACGTGA CCCGGCCGCG CCACATCGAG ATCCAGGTCT TCGGCGACAC CCAGGGCAAC
TGCGTCTACC TGTTCGAGCG GGACTGCTCG GTGCAGCGCC GCCACCAGAA GGTGCTCGAA
GAAGCGCCCG CGCCGGGCAT GAGCGCGGAG CGCCGGGCCG AGATGGGCGC GGCGGCGGTC
GCGGCGGCCA AGGCGGTCGG CTACGTCGGC GCGGGCACGG TCGAGTTCAT CGCCGAACCG
ACCGACGACG GCGATCTGCG CTTCTATTTC ATGGAGATGA ACACGCGGCT GCAGGTGGAG
CACCCGGTGA CCGAGGCGAT CACCGGCTTC GACCTGGTCG AGTGGCAACT GCGCGTGGCT
TCGGGCGAGC CGCTGCCGGC CGCGCAGGCC GATCTCAAGA TCCGCGGCCA CGCGATCGAG
GCGCGCATCT GCGCCGAGAA CCCCGACGCC AACTTCCTGC CCGCCACCGG CACGCTCGAC
GTGCTGCGCT GGCCGGCGCA CGTGGCTTTT CAGCGCGCAG GCGGCCCGGC GCCGAGCCGC
CTCAAGGCGG GCCGCGCCCC CTCGAGGGGC GACTCCGGTA CCCCGGAGGC GGGGGCTGAC
ATCTTTGTGC GGGTTGACGC CGGCGTGCGC GAGGGTGACG CGATCAGCCC GTATTACGAC
TCGATGGTCG CCAAGCTGAT CGTCTGGGGC GAGGACCGCG CCCAGGCCCT GGCGCGACTC
GATGCGGCGC TGCGCGACAC CCACATCGTC GGCTTGAACA CCAACGTCGC CTTCCTGCGC
CGGGTGGTCA ACAGCGAGGC GTTTGCGAGC GCCGACCTCG ACACCGCGCT GATCGAGCGC
GAACGCGCCG TGCTGTTCGA CCAGCCCGGC CTGCTGCTGG CGGTGGCCGC GGCCGGCGTG
GCCGCGCATG CGCTGCAGAG CGAGGCGGCG CTGGAGACGG CCGACCCCTG GTCGCGGCGC
GACGGCTGGC GCATCCACGG CGGGGCGCGG CGGCGTTTCG ATCTGCTGGT GGCGCGCGAA
CACCACGTCG CCACGCTCGA ACGGCTGCAC GACGGCGCGC TGCGCCTGGG CGTCAGCGGC
GCGAACTGCG TGTTCGATGC GCGAGCGCTC GGCGACGGCC ACCACGACAT CACGCTCGAC
GGCGAGCGCC ATCGCCTGAG CGTCTACATG CAGGGCGAGC GCGTCACGGT GTTCGGCGCC
GACGGCCTGC TGGAGCTGCA GGAGTTCGAC CCGATCGCCC ACGCGGGTGA AGCCGCGGTG
GGCGGCCGTC TGACCGCGCC GATGCCCGGC AAGGTGGTGG CGCTGATGGC CAAGGCGGGC
GACGTCGTCA AGCAGGGCCA GCCGCTGGCG GTGATGGAGG CGATGAAGAT GGAGCACACG
CTGGCCGCGC CGCGCGACGG CGTCGTCGCC GAACTGCTGT ACGCGGTGGG CGATCAGGTC
GGCGATGGCG CCGAGCTGCT GCGCCTGGCC GAGCAGTGA
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| Protein sequence | MFKKILIANR GEIACRVATT ARRLGVQTVA VYSDADARAQ HVMTCDEAVH IGASAAKDSY
LQWQRILDAA KATGAQAVHP GYGFLSENED FARACADAGL VFIGPPVAAI AAMGSKSAAK
SLMEQAGVPL VPGYHGDNNE PEFLLAQAER IGFPVLIKAS AGGGGRGMRR VDRAEDFLAS
LASCQREASA SFGNDHVLVE RYVTRPRHIE IQVFGDTQGN CVYLFERDCS VQRRHQKVLE
EAPAPGMSAE RRAEMGAAAV AAAKAVGYVG AGTVEFIAEP TDDGDLRFYF MEMNTRLQVE
HPVTEAITGF DLVEWQLRVA SGEPLPAAQA DLKIRGHAIE ARICAENPDA NFLPATGTLD
VLRWPAHVAF QRAGGPAPSR LKAGRAPSRG DSGTPEAGAD IFVRVDAGVR EGDAISPYYD
SMVAKLIVWG EDRAQALARL DAALRDTHIV GLNTNVAFLR RVVNSEAFAS ADLDTALIER
ERAVLFDQPG LLLAVAAAGV AAHALQSEAA LETADPWSRR DGWRIHGGAR RRFDLLVARE
HHVATLERLH DGALRLGVSG ANCVFDARAL GDGHHDITLD GERHRLSVYM QGERVTVFGA
DGLLELQEFD PIAHAGEAAV GGRLTAPMPG KVVALMAKAG DVVKQGQPLA VMEAMKMEHT
LAAPRDGVVA ELLYAVGDQV GDGAELLRLA EQ
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