More than 300 homologs were found in PanDaTox collection
for query gene Daro_0089 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009997  Sbal195_2976  carbamoyl-phosphate synthase L chain ATP-binding  54.07 
 
 		 680 aa  670    Shewanella baltica OS195  Bacteria  normal  1  normal  0.870775 
 
 
-
 
NC_008782  Ajs_3759  3-methylcrotonoyl-CoA carboxylase, alpha subunit  57.18 
 
 		 672 aa  679    Acidovorax sp. JS42  Bacteria  normal  1  normal  0.746239 
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  59.35 
 
 		 712 aa  748    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  55.27 
 
 		 681 aa  727    Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_4719  Carbamoyl-phosphate synthase L chain ATP-binding  57.73 
 
 		 667 aa  658    Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_1894  acetyl-CoA carboxylase, biotin carboxylase, putative  52.94 
 
 		 694 aa  649    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2736  biotin carboxylase/biotin-containing subunit  54.3 
 
 		 649 aa  664    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  51.98 
 
 		 666 aa  660    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1359  3-methylcrotonyl-CoA carboxylase alpha subunit  52.56 
 
 		 673 aa  642    Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.812437 
 
 
-
 
NC_006349  BMAA0805  putative acetyl-CoA carboxylase, biotin carboxylase  57.74 
 
 		 664 aa  650    Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  100 
 
 		 666 aa  1363    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  50.08 
 
 		 661 aa  654    Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  60.62 
 
 		 662 aa  761    Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  61.34 
 
 		 674 aa  754    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  60.41 
 
 		 674 aa  736    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2831  carbamoyl-phosphate synthase L chain ATP-binding  54.07 
 
 		 680 aa  671    Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  57.72 
 
 		 672 aa  702    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.782884 
 
 
-
 
NC_011992  Dtpsy_3040  Carbamoyl-phosphate synthase L chain ATP-binding  57.33 
 
 		 672 aa  682    Acidovorax ebreus TPSY  Bacteria  normal  0.233889  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1956  putative acetyl-CoA carboxylase, biotin carboxylase  58.04 
 
 		 664 aa  655    Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  59.04 
 
 		 665 aa  687    Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_007435  BURPS1710b_A0468  biotin carboxylase subunit of acetyl-CoA carboxylase  57.74 
 
 		 666 aa  653    Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  50.08 
 
 		 661 aa  654    Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2849  carbamoyl-phosphate synthase L chain ATP-binding  53.92 
 
 		 686 aa  668    Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1527  Carbamoyl-phosphate synthase L chain ATP-binding  54.07 
 
 		 685 aa  670    Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0426  3-methylcrotonoyl-CoA carboxylase, alpha subunit  59.34 
 
 		 665 aa  688    Burkholderia sp. 383  Bacteria  normal  0.967801  normal  1 
 
 
-
 
NC_008752  Aave_4351  3-methylcrotonoyl-CoA carboxylase, alpha subunit  57 
 
 		 677 aa  665    Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008835  BMA10229_0651  putative acetyl-CoA carboxylase, biotin carboxylase  57.89 
 
 		 664 aa  653    Burkholderia mallei NCTC 10229  Bacteria  normal  0.547961  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  61.32 
 
 		 668 aa  762    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  57.12 
 
 		 662 aa  700    Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_5035  carbamoyl-phosphate synthase L chain ATP-binding  58.89 
 
 		 665 aa  685    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.70526  normal  1 
 
 
-
 
NC_010086  Bmul_3469  carbamoyl-phosphate synthase L chain ATP-binding  60.62 
 
 		 670 aa  716    Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II0950  biotin carboxylase  58.33 
 
 		 666 aa  649    Burkholderia thailandensis E264  Bacteria  normal  0.790249  n/a   
 
 
-
 
NC_008784  BMASAVP1_0539  putative acetyl-CoA carboxylase, biotin carboxylase  57.89 
 
 		 664 aa  653    Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  74.47 
 
 		 667 aa  935    Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2800  carbamoyl-phosphate synthase L chain ATP-binding  51.01 
 
 		 696 aa  646    Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_5118  carbamoyl-phosphate synthase L chain ATP-binding  58.68 
 
 		 666 aa  682    Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A2053  putative acetyl-CoA carboxylase, biotin carboxylase  57.59 
 
 		 666 aa  651    Burkholderia pseudomallei 668  Bacteria  normal  0.698368  n/a   
 
 
-
 
NC_009438  Sputcn32_1716  carbamoyl-phosphate synthase L chain, ATP-binding  53.48 
 
 		 689 aa  669    Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2030  3-methylcrotonoyl-CoA carboxylase, alpha subunit  53.87 
 
 		 644 aa  642    Pseudomonas mendocina ymp  Bacteria  normal  0.0317693  normal  0.435789 
 
 
-
 
NC_010623  Bphy_3559  carbamoyl-phosphate synthase L chain ATP-binding  56.64 
 
 		 670 aa  684    Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.733851 
 
 
-
 
NC_007908  Rfer_3830  carbamoyl-phosphate synthase L chain, ATP-binding  57.14 
 
 		 674 aa  655    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4157  3-methylcrotonoyl-CoA carboxylase, alpha subunit  56.76 
 
 		 663 aa  661    Polaromonas sp. JS666  Bacteria  normal  0.825758  normal  1 
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  53.86 
 
 		 666 aa  644    Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal  1 
 
 
-
 
NC_009079  BMA10247_A1605  putative acetyl-CoA carboxylase, biotin carboxylase  57.89 
 
 		 664 aa  653    Burkholderia mallei NCTC 10247  Bacteria  normal  0.585456  n/a   
 
 
-
 
NC_007952  Bxe_B0963  3-methylcrotonoyl-CoA carboxylase, alpha subunit  57.77 
 
 		 679 aa  687    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.5845 
 
 
-
 
NC_007954  Sden_2248  carbamoyl-phosphate synthase L chain, ATP-binding  51.88 
 
 		 697 aa  649    Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  59.26 
 
 		 674 aa  745    Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_2573  carbamoyl-phosphate synthase L chain, ATP-binding  52.38 
 
 		 677 aa  644    Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  61.25 
 
 		 679 aa  748    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  60.03 
 
 		 675 aa  723    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1669  3-methylcrotonoyl-CoA carboxylase, alpha subunit  53.72 
 
 		 674 aa  673    Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5970  carbamoyl-phosphate synthase L chain ATP-binding  58 
 
 		 672 aa  683    Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  62.09 
 
 		 660 aa  781    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal  1 
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  59.04 
 
 		 665 aa  687    Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0475  carbamoyl-phosphate synthase L chain, ATP-binding  55.56 
 
 		 670 aa  658    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_4689  Carbamoyl-phosphate synthase L chain ATP-binding  56.57 
 
 		 692 aa  694    Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1455  carbamoyl-phosphate synthase L chain, ATP-binding  51.84 
 
 		 691 aa  656    Shewanella sediminis HAW-EB3  Bacteria  normal  0.419117  normal  1 
 
 
-
 
NC_008228  Patl_2928  carbamoyl-phosphate synthase L chain, ATP-binding  52.97 
 
 		 675 aa  650    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.321789  n/a   
 
 
-
 
NC_010524  Lcho_2116  carbamoyl-phosphate synthase L chain ATP-binding  54 
 
 		 692 aa  653    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.278717 
 
 
-
 
NC_008391  Bamb_4585  carbamoyl-phosphate synthase L chain, ATP-binding  59.79 
 
 		 666 aa  688    Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.747689 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  59.41 
 
 		 674 aa  746    Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2325  3-methylcrotonoyl-CoA carboxylase, alpha subunit  53.72 
 
 		 679 aa  672    Shewanella sp. MR-4  Bacteria  normal  1  normal  0.676879 
 
 
-
 
NC_008322  Shewmr7_2397  3-methylcrotonoyl-CoA carboxylase, alpha subunit  53.87 
 
 		 679 aa  676    Shewanella sp. MR-7  Bacteria  normal  0.63603  normal  0.616301 
 
 
-
 
NC_008345  Sfri_2730  carbamoyl-phosphate synthase L chain, ATP-binding  52.23 
 
 		 676 aa  660    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_3226  carbamoyl-phosphate synthase L chain ATP-binding  50.07 
 
 		 709 aa  632  1e-180  Shewanella woodyi ATCC 51908  Bacteria  normal  0.835408  normal  0.018356 
 
 
-
 
NC_007005  Psyr_2467  carbamoyl-phosphate synthase subunit L  51.28 
 
 		 649 aa  626  1e-178  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.30197  normal  0.0144387 
 
 
-
 
NC_010322  PputGB1_3665  carbamoyl-phosphate synthase L chain ATP-binding  52.77 
 
 		 650 aa  627  1e-178  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000243321  hitchhiker  0.000000000183935 
 
 
-
 
NC_012560  Avin_49520  acetyl-CoA carboxylase, biotin carboxylase  53.98 
 
 		 658 aa  628  1e-178  Azotobacter vinelandii DJ  Bacteria  normal  0.296412  n/a   
 
 
-
 
NC_010501  PputW619_1809  carbamoyl-phosphate synthase L chain ATP-binding  52.49 
 
 		 650 aa  627  1e-178  Pseudomonas putida W619  Bacteria  normal  1  normal  0.202229 
 
 
-
 
NC_013457  VEA_000380  methylcrotonyl-CoA carboxylase biotin-containing subunit  49.34 
 
 		 686 aa  625  1e-178  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_1774  carbamoyl-phosphate synthase L chain, ATP-binding  52.7 
 
 		 650 aa  626  1e-178  Pseudomonas putida F1  Bacteria  hitchhiker  0.00809985  hitchhiker  0.00202818 
 
 
-
 
NC_002947  PP_4067  acetyl-CoA carboxylase, biotin carboxylase, putative  52.4 
 
 		 650 aa  624  1e-177  Pseudomonas putida KT2440  Bacteria  normal  0.544109  unclonable  0.000000957509 
 
 
-
 
NC_009719  Plav_2788  carbamoyl-phosphate synthase L chain ATP-binding  52.52 
 
 		 673 aa  622  1e-177  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.683073  normal  0.298513 
 
 
-
 
NC_007492  Pfl01_3659  3-methylcrotonoyl-CoA carboxylase, alpha subunit  52.68 
 
 		 649 aa  623  1e-177  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00262153  normal  0.0752572 
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  49.86 
 
 		 700 aa  624  1e-177  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007204  Psyc_0311  3-methylcrotonoyl-CoA carboxylase, alpha subunit  49.93 
 
 		 706 aa  619  1e-176  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_0342  carbamoyl-phosphate synthase L chain, ATP-binding  49.72 
 
 		 704 aa  621  1e-176  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_38480  alpha subunit of geranoyl-CoA carboxylase, GnyA  52.71 
 
 		 655 aa  618  1e-175  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3277  alpha subunit of geranoyl-CoA carboxylase, GnyA  52.03 
 
 		 655 aa  607  9.999999999999999e-173  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  52.27 
 
 		 673 aa  599  1e-170  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0018  biotin carboxylase  52.27 
 
 		 673 aa  599  1e-170  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_1514  carbamoyl-phosphate synthase L chain, ATP-binding  52.77 
 
 		 662 aa  600  1e-170  Acidiphilium cryptum JF-5  Bacteria  normal  0.0937077  n/a   
 
 
-
 
NC_008786  Veis_0847  carbamoyl-phosphate synthase L chain, ATP-binding  51.65 
 
 		 730 aa  600  1e-170  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0039  carbamoyl-phosphate synthase L chain ATP-binding  52.86 
 
 		 655 aa  599  1e-170  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.540073  n/a   
 
 
-
 
NC_008044  TM1040_0738  3-methylcrotonoyl-CoA carboxylase, alpha subunit  52.6 
 
 		 645 aa  595  1e-169  Ruegeria sp. TM1040  Bacteria  normal  0.623779  normal  1 
 
 
-
 
NC_006368  lpp1792  hypothetical protein  48.11 
 
 		 654 aa  592  1e-168  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  47.96 
 
 		 654 aa  587  1e-166  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_4048  putative acyl-CoA carboxylase biotin-carrying subunit  50 
 
 		 670 aa  583  1.0000000000000001e-165  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.139435  normal  0.287749 
 
 
-
 
NC_007643  Rru_A1941  3-methylcrotonoyl-CoA carboxylase, alpha subunit  52.83 
 
 		 686 aa  581  1e-164  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.891813  n/a   
 
 
-
 
NC_009620  Smed_4535  carbamoyl-phosphate synthase L chain ATP-binding  50.66 
 
 		 662 aa  577  1.0000000000000001e-163  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_3151  carbamoyl-phosphate synthase L chain ATP-binding  51.7 
 
 		 657 aa  576  1.0000000000000001e-163  Caulobacter sp. K31  Bacteria  normal  1  normal  0.111688 
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  48.44 
 
 		 661 aa  573  1.0000000000000001e-162  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008687  Pden_3639  carbamoyl-phosphate synthase L chain, ATP-binding  52.75 
 
 		 642 aa  572  1.0000000000000001e-162  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_2124  carbamoyl-phosphate synthase L chain, ATP-binding  49.1 
 
 		 666 aa  572  1.0000000000000001e-162  Nitrobacter hamburgensis X14  Bacteria  normal  0.494302  n/a   
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  47.99 
 
 		 661 aa  573  1.0000000000000001e-162  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal  1 
 
 
-
 
NC_011004  Rpal_2809  Carbamoyl-phosphate synthase L chain ATP-binding  49.78 
 
 		 670 aa  571  1e-161  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.978814  n/a   
 
 
-
 
NC_010511  M446_2316  carbamoyl-phosphate synthase L chain ATP-binding  51.19 
 
 		 662 aa  569  1e-161  Methylobacterium sp. 4-46  Bacteria  normal  0.0459588  normal  0.101585 
 
 
-
 
NC_007802  Jann_1147  3-methylcrotonoyl-CoA carboxylase, alpha subunit  51.42 
 
 		 667 aa  567  1e-160  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.221564 
 
 
-
 
NC_011666  Msil_3434  Carbamoyl-phosphate synthase L chain ATP-binding  50.66 
 
 		 626 aa  565  1.0000000000000001e-159  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007925  RPC_2781  carbamoyl-phosphate synthase L chain, ATP-binding  47.9 
 
 		 667 aa  563  1.0000000000000001e-159  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0940378  normal  0.476201 
 
 
-
 
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