| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3226 |
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| Symbol | |
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| ID | 6117545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3954464 |
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| End bp | 3956593 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634770 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001761591 |
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| Protein GI | 170727565 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.835408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.018356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCCC AAACGTCAAA AAATAATAAC ACAGGCAAAA CCTTGCTGAT TAAGAAGCTG
TTAATAGCCA ACCGAGGCGA AATAGCCTGT CGCATCATAA AAACCGCCAA AGCCATGGGG
ATCCGTACCG TCGCCCTCTA CTCTGACGCC GATATTGATG CCCGTCATGT GGCTATGGCC
GATGAGTCTT TCTACCTTGG TGGCAGTGCA CCGGCAGACT CCTACCTCAA AGGCGATTTT
ATCGTCGAAA TAGCCAAAAA ATCTGGCGCA CAAGCTATCC ATCCTGGCTA CGGTTTCCTA
TCAGAGAATG CCGATTTTGC GCGTTTATGT GAGCAATCAG ATATCGCTTT TGTTGGACCA
AGCGCAGCTG CTATCGACTC TATGGGCAGC AAGAGTGCGG CTAAAGAGAT CATGGGCGCC
GCCAAGGTCC CACTGGTTCC CGGTTATCAC GGTGATGAGC AAGAGGATGC GTTATTAGTT
AGCGAAGCAA AGAAAATGGG CTTCCCACTA CTTATCAAAG CGGCCTTTGG CGGTGGCGGT
AAAGGAATGC GTATCGTTGA GAACGAAACT GAAGTTCTGG ACGCCATCCA CTCAGCTCGT
CGTGAAGCTA TCTCCTCTTT TGGCAACGAC AAGCTACTGA TGGAGCGTTA TCTTCGCCAA
CCTCGCCACG TCGAAGTGCA GGTCTTTGCC GATAATCATG GCAACTGTAT CTATCTTTCA
GACAGAGACT GCTCTATCCA GCGACGCCAC CAAAAAGTTG TCGAGGAAGC ACCGGCGCCA
GGATTAAGTG ATGAGTTAAG AGTCAAGATG GGAGAAGCGG CCGTTGCAGC GGCAAAAGCC
ATCGACTATC AAGGTGCAGG CACAGTTGAA TTTTTGCTTG ATACTGACAA CAGCTTCTAC
TTTATGGAGA TGAACACCCG TCTGCAGGTT GAGCACCCAG TAACCGAGCT GGTAACAGGC
CAAGATCTCG TCAAGTGGCA GCTGATGGTT GCCAGTGGTC ATCCACTGCC ACTAGCCCAA
GATGAAGTCA GAATACATGG CCACTCTTTT GAGGTGCGTA TCTACGCAGA AGACCCGCAA
AATGAGTTTC TTCCTGCCAG CGGTAAACTC AACTTCCTGC GCGAACCAGA GCAAAGCAGA
TTTGTACGTA TCGACTCTGG GATCCGTGAA AATGATGTGA TCAGTAACTT TTACGATCCC
ATGATCTCTA AATTAATTGT TTGGGATGAA TCCCGCCCAA GAGCGCTACA ACGTCTGGTG
CACTCATTAG AGTCATATCA GATAAGTGGC CTAAAACATA ATATCGAGTT TCTTGCTAAT
ATCGCCGAGC ATCAAGCATT TCGTGATGCT AACTTCAGCA CAGACTTTAT CGACCGTTAC
GGTGATGGCC TTATCGGACG TGGCCTAAGT GGCAATGCCA TTAAGGATGA GCAAACAGCA
TTGGCACTAG CCGCTCTGTA TCAAGTCTGT GCCCGAAGAG TGGCAGCAAA AGCCTGTGCC
ATTAACAGCA ATGACCCATA CTCACCTTGG GGGACAGTCA GCGGCTTTAG ACTCAATAGC
GCCAGTCAGC ATCAGGTCTC TCTGCTCGAT GATAATCATG AGCTGCAACA TCTTGAGCTT
ATTGAAACCT CTGTTGGCGG CAAATCTATC TTCCAGATGC AGCAAGGGGA CAACCTCTAT
GTGCTCAATG GTGAGCTGCA CGGTGAACTG CTCCATGCAG AGATCTCACT GAGCCAAGCA
GATAAAAACC GTGATCCACT GACAGATAAA AACCAAGCAC ACAAATTCAA GGTGCCTGTG
AGTCAGGTCG ATGATGACTT TACCCTTTTT ATTAACTCTA GTAGTTACCA TTTCCGTGCG
ATCCAAACTG AGCTAACTGA GGAGCAGGAG TGCCTTGCCG ATAAGCTTAA AGCGCCGATG
AATGGCACAG TGGTCACTCA TCTGGTGAAT GCTGGCGACA CAGTGACCGC AGGACAAGGC
TTAATGGTGA TGGAAGCCAT GAAAATGGAA TATACAATAG AATCTCCCTT TGATGGCATT
GTCAGTGCAT TCTTCTTCGA CATAGGTGAG CTAGTCAGTG ATGGCGCAGT TTTAGTTGAT
GTTGAACCTG CTAAAAAAGA AGAGGGATAA
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| Protein sequence | MVAQTSKNNN TGKTLLIKKL LIANRGEIAC RIIKTAKAMG IRTVALYSDA DIDARHVAMA
DESFYLGGSA PADSYLKGDF IVEIAKKSGA QAIHPGYGFL SENADFARLC EQSDIAFVGP
SAAAIDSMGS KSAAKEIMGA AKVPLVPGYH GDEQEDALLV SEAKKMGFPL LIKAAFGGGG
KGMRIVENET EVLDAIHSAR REAISSFGND KLLMERYLRQ PRHVEVQVFA DNHGNCIYLS
DRDCSIQRRH QKVVEEAPAP GLSDELRVKM GEAAVAAAKA IDYQGAGTVE FLLDTDNSFY
FMEMNTRLQV EHPVTELVTG QDLVKWQLMV ASGHPLPLAQ DEVRIHGHSF EVRIYAEDPQ
NEFLPASGKL NFLREPEQSR FVRIDSGIRE NDVISNFYDP MISKLIVWDE SRPRALQRLV
HSLESYQISG LKHNIEFLAN IAEHQAFRDA NFSTDFIDRY GDGLIGRGLS GNAIKDEQTA
LALAALYQVC ARRVAAKACA INSNDPYSPW GTVSGFRLNS ASQHQVSLLD DNHELQHLEL
IETSVGGKSI FQMQQGDNLY VLNGELHGEL LHAEISLSQA DKNRDPLTDK NQAHKFKVPV
SQVDDDFTLF INSSSYHFRA IQTELTEEQE CLADKLKAPM NGTVVTHLVN AGDTVTAGQG
LMVMEAMKME YTIESPFDGI VSAFFFDIGE LVSDGAVLVD VEPAKKEEG
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