| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0039 |
|---|
| Symbol | |
|---|
| ID | 5379639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 43219 |
|---|
| End bp | 45186 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640832688 |
|---|
| Product | carbamoyl-phosphate synthase L chain ATP-binding |
|---|
| Protein accession | YP_001368599 |
|---|
| Protein GI | 153007384 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.540073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA AGATACTGAT TGCCAATCGC GGAGAAATTG CCTGCCGGGT CATTCGCACG
GCGCGGGAAT TGGGTATTGC CACCGTCGCA ATTTATTCCG ATGCGGATGC CAATGCGCTT
CATGTCGAGA TGGCCGATGA GGCGGTGCGC GTCGGCCCTG CCATTTCTGC GCAAAGCTAT
CTGAATGTCG AGGCTATCAT CAAGGCTGCG AAGGAAACCG GCGCGGAGAC AATCCATCCG
GGCTATGGGT TTCTCTCCGA AAATGCCGGT TTCGTGGATG CCGTCGAGGC GGCGGGGCTT
GTCTTCATCG GCCCATCGGC CAAAGCTATT CGCGCCATGG GGCTGAAGGA TGCCGCCAAA
GCATTGATGG AAAAGGCAGG TGTGCCGGTT GTTCCGGGCT ATCACGGCGA TAATCAGGAT
GGAGCCTTCC TCAAAAGCGA GGCGGACCGC ATCACCTATC CCGTGCTCAT CAAGGCACGT
GCAGGCGGTG GCGGCAAGGG CATGCGCCGC GTCGATCAGT CGGTGGATTT CGCAGCGGCG
CTGGACAGCG CGCGGCGCGA GGCGGAAGCC TCTTTCGGCG ATAGTGCCGT GCTGGTCGAA
AAATACATGA CCAAGCCACG CCATATCGAG GTGCAGGTCT TCGGCGATAA TCATGGCAAT
GCCGTGCATC TGTTCGAGCG CGATTGTTCG CTGCAACGCC GCCACCAGAA GGTGATCGAG
GAAGCACCTG CGCCCGGCAT GACGCCGGAA ATGCGCGCCG CCATGGGCGA AGCGGCGGTG
AAGGCGGCTT TGGCCATTGG CTATTGCGGC GCGGGCACGG TGGAGTTCAT CGCCGATGTT
TCGGAAGGTC TGCGGCCGGA CCGCTTCTTC TTCATGGAAA TGAACACCCG CCTGCAAGTG
GAGCATCCGG TGACGGAAGC GATTACCGGC CTCGATCTGG TCGAATGGCA ATTGCGCGTT
GCTTCCGGCG AAGTCTTGCC GAAACGACAG GATGAACTTT CCATAGATGG CTGGGCGTTC
GAGGTGCGGC TTTATGCGGA AGATCCGGCG CGGGATTTTC TGCCTGCAAC CGGCAAGCTT
GCTCTGTTCG CACCGCCTGA AAATGCCCGT GTCGATTCCG GTGTGCGAAC CGGCGATACG
ATCACGCCGT TCTATGATCC GATGATCGCC AAGATCATCG CTCATGGTGC AACGCGCGAT
GAGGCACTGA ACCGGCTTGA TGCGAGCCTG AACAAGACCC GGATTGCGGG CCTCGTCACC
AATCGCCAAT TTTTGTCGGC GCTTTGCGAT CTTAAAGCTT TCCGTACAGG CGATGTCGAT
ACCGGCCTGA TTGCACGCGA GACGGCGACA CTGTTTGCCG ATAAGCAGCC TTCGGATATC
GCATTTGCGC TGGCTGCACT CGGCGCGCTC GATCTTCTGG ATGCGCCAGC AAAGGATGAT
CCATGGTCGA GCCTGCGCGG GTTCCGGCTT TGGGGTGAGG CATCGCGCTC GGCCCTTATC
GATCATCATG GCGAGCGCCA CACGGTCAGC TTCACGACCA TGGGTGACAG GCATTTCGGC
TTTGCTTTCG GCACTATCGA AATCCGTTTC CATGAAAACG GGCTGGTTCG CTTTGCTGTT
GATGGCTGCG TGTCGGAGGC GTCCGTCGTG CGCATCGGAC ACGATGTGAC GGTGCAACTC
GAAGGTCGCG ACACCATATT TCATCATGTG CAGTCTGTTG GCGCGGAAGA GGATGCTTCG
AGCGAAAGCC GCATCCTGTC ACCGATGCCG GGACTGGTAC GACTGGTTTC CGTCGTGGAG
GGGGCGAGCG TCGCCAAGGG CGATCCGCTG GTAACGATGG AAGCGATGAA GATGGAACTG
TCACTGACCG CGCCGCGCGA CGGCAAGGTT GCGTCCGTAA CTGTTGTAGC GGGCGATCAG
GTCAATGAAG GCATCCTTCT TGTAGAACTG GAGGAAGAAC ATGGCTGA
|
|---|
| Protein sequence | MFKKILIANR GEIACRVIRT ARELGIATVA IYSDADANAL HVEMADEAVR VGPAISAQSY
LNVEAIIKAA KETGAETIHP GYGFLSENAG FVDAVEAAGL VFIGPSAKAI RAMGLKDAAK
ALMEKAGVPV VPGYHGDNQD GAFLKSEADR ITYPVLIKAR AGGGGKGMRR VDQSVDFAAA
LDSARREAEA SFGDSAVLVE KYMTKPRHIE VQVFGDNHGN AVHLFERDCS LQRRHQKVIE
EAPAPGMTPE MRAAMGEAAV KAALAIGYCG AGTVEFIADV SEGLRPDRFF FMEMNTRLQV
EHPVTEAITG LDLVEWQLRV ASGEVLPKRQ DELSIDGWAF EVRLYAEDPA RDFLPATGKL
ALFAPPENAR VDSGVRTGDT ITPFYDPMIA KIIAHGATRD EALNRLDASL NKTRIAGLVT
NRQFLSALCD LKAFRTGDVD TGLIARETAT LFADKQPSDI AFALAALGAL DLLDAPAKDD
PWSSLRGFRL WGEASRSALI DHHGERHTVS FTTMGDRHFG FAFGTIEIRF HENGLVRFAV
DGCVSEASVV RIGHDVTVQL EGRDTIFHHV QSVGAEEDAS SESRILSPMP GLVRLVSVVE
GASVAKGDPL VTMEAMKMEL SLTAPRDGKV ASVTVVAGDQ VNEGILLVEL EEEHG
|
|---|
| |