| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3639 |
|---|
| Symbol | |
|---|
| ID | 4582191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 789367 |
|---|
| End bp | 791295 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639770949 |
|---|
| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
|---|
| Protein accession | YP_917402 |
|---|
| Protein GI | 119386347 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAGA AAATCCTGAT CGCCAACCGG GGCGAGATCG CCTGCCGGGT CATCGATACC
GCCCGCAAGC TGGGCGTGCG CACGGTCGCG GTCTATTCCG AGGCCGACCG CGCTGCGCGT
CATGTCACCA TCGCCGACGA GGCCGTTCCC ATCGGCGGTC CCGCACCCAA GGACAGCTAC
CTGCGCGGCG ATGCCATCAT CCGGGCTGCG CTCGACACCG GGGCGCAGGC CATCCATCCC
GGCTACGGCT TTCTCAGCGA GAACCCCGAC TTCGTCGATG CAGTGACGGC CGCGGGCCTG
ACCTTCATCG GCCCTTCGGC CGATGCCATC CGCAAGATGG GCCTCAAGGA CGCAGCCAAG
GCGCTGATGG CCGAGGCGGG CGTCCCGGTC GTCCCCGGCT ATCACGGCGA GAACCAGGAC
GCCGGCCATC TTGCGGCGCA GGCGGACAAG ATCGGCTATC CCGTGCTGAT CAAGGCGGTG
GCCGGCGGCG GCGGCAAGGG CATGCGCCTG GTCGAGCGTG CAGGGGACTT CGCCGCTGCG
CTGCAATCCG CGCAGGGCGA GGCCGCCACC GCCTTCGGCA ACCCGGCCGT ACTGGTCGAG
AAATACATCC AGCAGCCCCG CCATATCGAG GTGCAGGTCT TCGGCGACGG CCATCGCGCC
GTCCACCTGT TCGAGCGCGA CTGTTCGCTG CAACGCCGCC ACCAGAAGGT GATCGAGGAG
GCTCCGGCGC CCGGCATGAC GCCCGAGATG CGTGCCGCCA TGGGCGCCGC CGCCGTCCGC
GCCGCCGAGG CGATCGGCTA TGCCGGCGCC GGCACCATCG AATTCATCGT CGATGGCAGC
CGGGGCCTGC GCTCCGACGG CTTCTGGTTC ATGGAGATGA ACACCCGCCT TCAGGTCGAG
CATCCGGTGA CCGAACTCGT CACCGGCGTC GATCTGGTGG AATGGCAGCT GCGCGTCGCC
AGCGGAGAGC CGCTGCCGGC CAGGCAGGAG GATCTGGCGA TCACCGGTCA TGCCTTCGAG
GCGCGGCTTT ATGCCGAGGA CGTGCCCGCG GGCTTCCTGC CCGCCACCGG CCGGCTTGCG
CATCTGCGTT TTCCCGACCA TGCCCGGATC GAGACCGGGG TGCGTCCCGG CGACGCGATC
TCGCCCTGGT ACGACCCGAT GATCGCCAAG ATCGTCACCC ATGGCGCCAC CCGCGCCATC
GCGCTGCGCG CGCTCGAGGC GGCGCTGGTC GATACCGAGG TGGCGGGCTC GGTCACCAAT
GTCGATTTCC TGATTGCGCT GGCCCGGCAC GAGGGTTTCG GCAAGGGCGA GGTCGATACC
GGCCTGATCG CCCGCGACCT TCAGGCGCTG ATCGCCGCTG CCGAGCCCGA TCCGCGGGCC
AAGGCGCTGG CGGTGCTGGG CCTTGCCGGA CTGGACGACC CCATGGTGCG CGGCGGCATC
ACGCTGTGGC AGCCGCTGAG CCGTACCATC GCCTGGGAAG GCGGCGAGGC GGTGCTGGAG
GTGCTCGGCC CCGGCGCCGC CCGCGTCACG CTGGACGGCA GCAGCCACGA GATCGCCTAT
GAAGGCGGGC GCTGGTGGGT GGATGGCAGC CCGCGCCGCT CGCGCATCGT CAACCATGCG
GCCGGCACCA GCGTCTTCGG CGGCCGCTCG CTGACGCTTG CGCCGCTCGA CCCGCTGGCG
CGCGGCGGCG AAGAGGCGGG CGGCGGCATG ACGCTTTCGC CCATGCCGGG GCTCGTCAAG
GCGATCTTCG TCGAACCGGG GCAGGAGGTC GCGGCGGGCG CGCGGCTGGC GATCCTCGAG
GCGATGAAGA TGGAACATAC GCTGACCGCC GCCCGCGACG GTCGCGTGGC CGAGGTCTTT
GCCCGGGCCG GCGACCAGGT CGAGGCCGGC GCGGCGCTGA TCCGGCTGGA GGAGGAAGGG
GACGCATGA
|
|---|
| Protein sequence | MFQKILIANR GEIACRVIDT ARKLGVRTVA VYSEADRAAR HVTIADEAVP IGGPAPKDSY
LRGDAIIRAA LDTGAQAIHP GYGFLSENPD FVDAVTAAGL TFIGPSADAI RKMGLKDAAK
ALMAEAGVPV VPGYHGENQD AGHLAAQADK IGYPVLIKAV AGGGGKGMRL VERAGDFAAA
LQSAQGEAAT AFGNPAVLVE KYIQQPRHIE VQVFGDGHRA VHLFERDCSL QRRHQKVIEE
APAPGMTPEM RAAMGAAAVR AAEAIGYAGA GTIEFIVDGS RGLRSDGFWF MEMNTRLQVE
HPVTELVTGV DLVEWQLRVA SGEPLPARQE DLAITGHAFE ARLYAEDVPA GFLPATGRLA
HLRFPDHARI ETGVRPGDAI SPWYDPMIAK IVTHGATRAI ALRALEAALV DTEVAGSVTN
VDFLIALARH EGFGKGEVDT GLIARDLQAL IAAAEPDPRA KALAVLGLAG LDDPMVRGGI
TLWQPLSRTI AWEGGEAVLE VLGPGAARVT LDGSSHEIAY EGGRWWVDGS PRRSRIVNHA
AGTSVFGGRS LTLAPLDPLA RGGEEAGGGM TLSPMPGLVK AIFVEPGQEV AAGARLAILE
AMKMEHTLTA ARDGRVAEVF ARAGDQVEAG AALIRLEEEG DA
|
|---|
| |