| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1455 |
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| Symbol | |
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| ID | 5610895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1725019 |
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| End bp | 1727094 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640932321 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001473194 |
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| Protein GI | 157374594 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.419117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTA AACTGCTAAT CGCCAACCGA GGCGAGATCG CCTGTCGTAT TATCAAAACA
GCCAAAGCAA TGGGAGTGCG GACAGTAGCC CTCTACAGTG ATGCCGATAT CGACGCTCGC
CATGTCGCCA TGGCCGATGA ATCATTTTAT CTCGGTGGCA GCGCACCGGC AGACTCCTAC
CTTAAAGCCT CGGCTATCAT TGATATCGCC AAGAAGTCCG GTGCCCAGGC TATCCATCCC
GGCTATGGCT TTCTCTCTGA AAATGCGGAC TTCGCCAGGC TATGTGAACA ATCGGGGATC
AGTTTCGTGG GCCCCACGGC CGATGCGATT GACTCAATGG GCAGCAAGAG TGCGGCGAAA
GAGATCATGG GCGCGGCCAA TGTTCCTCTG GTCCCGGGTT ATCACGGTGA CGCACAAGAG
GATCAACTGC TCGTCGATGA AGCCGATAAG ATGGGCTTTC CTCTGCTTAT CAAGGCAGCC
TTCGGCGGCG GCGGTAAAGG CATGCGTATC GTCGAAAGTA GCGATGAAGT ACTCGAGGCT
ATTCAATCTG CGCGCCGGGA GGCTATCTCC TCTTTCGGTA ACGACAAGCT CCTGATGGAG
CGTTATCTGC GTCAACCCCG TCATGTCGAG GTGCAGGTGT TCGCCGATAC CCAAGGCAAC
TGCATCTATC TCTCAGATCG TGACTGCTCG ATACAACGCC GCCATCAAAA AGTGGTAGAG
GAGGCGCCAG CGCCGGGCCT GAGTGATGAA CTCAGAGTCA AGATGGGCGA AGCCGCCGTC
GCTGCGGCCA AGGCTATCGA CTATCGAGGC GCCGGAACCG TCGAATTCCT GCTCGATACC
GATGGCAGCT TCTACTTCAT GGAGATGAAC ACCCGCCTTC AGGTAGAGCA TCCGGTCACT
GAGATGGTCA CAGGACAAGA CCTGGTAAAA TGGCAACTCA TGGTCGCCAG TGGCAGTGAA
CTACCGCTCA CTCAAGAGGA GGTGCGCATT CATGGCCACT CCTTTGAGGT ACGTATCTAC
GCCGAAGATC CCCATAACGA TTTTCTGCCG GCCAGCGGTA AACTGAACTT CCTGCGCGAG
CCGGAGCAGA GCAAGCATGT GCGCATCGAC TCGGGCATTC GTGAAAATGA TGTAATAAGT
AACTTTTACG ACCCTATGAT CTCCAAGCTT ATCGTTTGGG ATGAATCACG CCCTCGGGCA
CTACAGCGTT TAGTGCATTC ACTGGAGTCA TACCAGATCA GCGGCCTGAA GCACAACATA
GAGTTCCTGG CCAATATCGC CGAACACAAA GCCTTCAGCG ATGCCAATTT CAGTACCGAC
TTTATCGACC GTTACGGTGA ATCCCTTATC GGCATGGCAT CGAGTGATGA ACATACGGCG
TTGGCCTTGG CAGCACTTTA TCAACTTTGC GCCCGCAAGG CCGAGGCCAA AGCGTGCGCC
ATCAACAGTC AGGACCCTTA CTCTCCCTGG GGAGCCGTAA GCGGGTTCAG GCTAAATAGC
GCAAGCCTGC ATAATGTGGC TCTTCTCGAT GATAACCATG ACATTCAGCA CCTTGAGCTC
ACTGAAACCT TAGTGGGTGA ACAGTCCCTC TATCAACTTG AGCTTAATGG CAGCCATTTA
GTGCTAAAGG GCGAGTTAAA GGGTGAGATG CTGCACGCTG AGATCTCAAA CCATGCCCAC
GCCAATTGTA GCGACACACA CAAAACCAGT GGTCACAAAG TCAAGGTTCC AGTCAGCCAG
ACAGGCGATG ACTTCACCCT GTTTATCAAC TCGACCAGTT ATCACTTCCG TGCGATTCAA
ACAGAAATAG ATGAAGAGCA GGAGTGTCTG GAAGATAAAC TAAAGGCGCC GATGAACGGC
ACTATCGTCA CCCACTTAGT AGAGAAAGGT GACGTCGTGA GCGCAGGGCA AGGTCTGATG
GTGATGGAGG CGATGAAGAT GGAGTACACC ATCGAGTCTC CCTTCGATGG TGTAGTCTCA
GCTTTCTTCT TCGAGCCGGG AGAACTGGTC AGCGACGGTA GCCTATTGGT CGAAGTAACA
GCCAATGAAG CACCAACTGA AAAAAGTGAG GCTTGA
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| Protein sequence | MFTKLLIANR GEIACRIIKT AKAMGVRTVA LYSDADIDAR HVAMADESFY LGGSAPADSY
LKASAIIDIA KKSGAQAIHP GYGFLSENAD FARLCEQSGI SFVGPTADAI DSMGSKSAAK
EIMGAANVPL VPGYHGDAQE DQLLVDEADK MGFPLLIKAA FGGGGKGMRI VESSDEVLEA
IQSARREAIS SFGNDKLLME RYLRQPRHVE VQVFADTQGN CIYLSDRDCS IQRRHQKVVE
EAPAPGLSDE LRVKMGEAAV AAAKAIDYRG AGTVEFLLDT DGSFYFMEMN TRLQVEHPVT
EMVTGQDLVK WQLMVASGSE LPLTQEEVRI HGHSFEVRIY AEDPHNDFLP ASGKLNFLRE
PEQSKHVRID SGIRENDVIS NFYDPMISKL IVWDESRPRA LQRLVHSLES YQISGLKHNI
EFLANIAEHK AFSDANFSTD FIDRYGESLI GMASSDEHTA LALAALYQLC ARKAEAKACA
INSQDPYSPW GAVSGFRLNS ASLHNVALLD DNHDIQHLEL TETLVGEQSL YQLELNGSHL
VLKGELKGEM LHAEISNHAH ANCSDTHKTS GHKVKVPVSQ TGDDFTLFIN STSYHFRAIQ
TEIDEEQECL EDKLKAPMNG TIVTHLVEKG DVVSAGQGLM VMEAMKMEYT IESPFDGVVS
AFFFEPGELV SDGSLLVEVT ANEAPTEKSE A
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