| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4067 |
|---|
| Symbol | |
|---|
| ID | 1042147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4591739 |
|---|
| End bp | 4593691 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637147474 |
|---|
| Product | acetyl-CoA carboxylase, biotin carboxylase, putative |
|---|
| Protein accession | NP_746193 |
|---|
| Protein GI | 26990768 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.544109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000957509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC CCGCTTTGAC CACCCTGCTG GTCGCCAACC GCGGCGAAAT CGCCTGCCGG
GTGATGCGCA CCGCCAAGGC CATGGGCCTG ACCACTGTCG CCGTGCACAG CGCCACCGAC
CGTGACGCCC GTCACAGCCG CGAAGCCGAC ATCCGCGTCG ACCTGGGCGG CACCAAGGCT
GCCGAAAGCT ACCTGCTGGT CGACAAGCTG CTGGCCGCAG CCAAGGCCAG CGGCGCCCAG
GCCATTCACC CAGGTTATGG CTTTCTGTCT GAGAACGCAG GTTTCGCCCG CGCCATCGAG
CAGGCCGGGC TGATCTTCCT CGGCCCACCG GCCAGCGCCA TCGACGCCAT GGGCAGCAAA
TCGGCAGCCA AGGCGCTGAT GGAAGCGGCC GGCGTGCCGT TGGTGCCGGG CTACCACGGC
GAGGCCCAGG ACCTGGACAC CTTCCGCGCT GCGGCCGAAC GCATCGGCTA CCCGGTGCTG
CTCAAGGCCA GCGCGGGAGG CGGTGGCAAG GGCATGAAAG TGGTCGAGGA AGAAAGCCAA
CTGGCCGACG CCCTGGCCTC GGCCCAGCGT GAGGCACAGT CGTCGTTCGG CGATGCGCGC
ATGCTGGTGG AAAAGTACGT GCTCAAGCCA CGCCACGTGG AGATTCAGGT GTTCGCCGAT
CAGCACGGCA ACTGCCTGTA CCTCAACGAA CGCGACTGTT CCATTCAGCG CCGCCATCAG
AAGGTGGTGG AAGAGGCCCC TGCCCCCGGC CTGTCGCCCG AACTGCGCCG GGCCATGGGC
GAAGCGGCGG TGCGTGCCGC CCAGGCTATC GGTTACGTGG GTGCCGGCAC GGTGGAGTTT
CTGCTTGATG CCCGCGGCGA ATTCTTCTTC ATGGAGATGA ACACTCGCCT GCAAGTGGAA
CACCCGGTCA CCGAGGCCAT AACCGGCCTG GACCTTGTTG CCTGGCAAAT TCGCGTGGCC
TGCGGCGAAG CCCTGCCGAT CACACAGGAA CAGGTACCGC TGATCGGCCA TGCCATCGAA
GTACGCCTGT ATGCCGAAGA CCCGGCCAAC GATTTTTTAC CCGCGACCGG CAAATTAGCG
CTGTACCGTG AATCGGCACC TGGCGAAGGC CGGCGGGTGG ACAGTGGGGT CAGCGAAGGC
GATGTGGTGT CGCCGTTCTA CGACCCGATG CTGGGCAAGC TGATCGCCTG GGGCGAAGAC
CGCGAGCAGG CGCGTTTGCG CTTGCTGGCC ATGCTCGATG AGTTCGCCAT TGGCGGGCTG
AAAACCAACA TTGCCTTCCT GCGGCGCATT CTCGCCCACC CGGCATTTGC TGCAGCGGAG
TTGGATACTG GCTTCATTCC CCGCCACCAG GATGTGCTGC TGCCGGCGCC ACGTGCGCTG
CCGGCTGCCT TTTGGGAGGC GGCAGCCGAA GCCTGGCTGC AGGGCCAGGC GGGGCATCAG
CGCGAAGACG ATCGCCATTC GCCGTGGAGC GGGAGTAATG GCCTGCGCTT GGGCCTACCG
GCACGCAGCA GCTTGCATCT GGTGAGCGCT GGGCAAGATC AGGCAGTGGC CCTGGAACGC
AGCGCTGCTT CTACCTGGCA GCTGCAAGGT GAGCAGTTGG TGCATGACCA GAACGGCGTG
CGTCGCCAGC ATCTGGCAAT CCGTCGCGGT GGCACGCTGT ACCTGCACTG GGAGGGCGAA
ATGCATGCCA TCGAAGCTTT CGACCCGATT GCCGAGGCCG AAGCCAGCCA CAGCCATCAG
GGTGGGCTGG GTGCGCCCAT GAACGGCAGT ATCGTGCGGG TGCTGGTCGA ACCTGGCCAG
GTGGTGGAAG CCGGTACTGC GCTGTTGGTA CTGGAGGCCA TGAAGATGGA GCACAGCATT
CGTGCGCCGC ATGCCGGCAC GGTGAAGGCG CTGTTTTGCC TGGAGGGGGA TATGGTCAGC
GAAGGGACTG TGCTGGTCGA ACTGGTGGAA TAA
|
|---|
| Protein sequence | MSRPALTTLL VANRGEIACR VMRTAKAMGL TTVAVHSATD RDARHSREAD IRVDLGGTKA
AESYLLVDKL LAAAKASGAQ AIHPGYGFLS ENAGFARAIE QAGLIFLGPP ASAIDAMGSK
SAAKALMEAA GVPLVPGYHG EAQDLDTFRA AAERIGYPVL LKASAGGGGK GMKVVEEESQ
LADALASAQR EAQSSFGDAR MLVEKYVLKP RHVEIQVFAD QHGNCLYLNE RDCSIQRRHQ
KVVEEAPAPG LSPELRRAMG EAAVRAAQAI GYVGAGTVEF LLDARGEFFF MEMNTRLQVE
HPVTEAITGL DLVAWQIRVA CGEALPITQE QVPLIGHAIE VRLYAEDPAN DFLPATGKLA
LYRESAPGEG RRVDSGVSEG DVVSPFYDPM LGKLIAWGED REQARLRLLA MLDEFAIGGL
KTNIAFLRRI LAHPAFAAAE LDTGFIPRHQ DVLLPAPRAL PAAFWEAAAE AWLQGQAGHQ
REDDRHSPWS GSNGLRLGLP ARSSLHLVSA GQDQAVALER SAASTWQLQG EQLVHDQNGV
RRQHLAIRRG GTLYLHWEGE MHAIEAFDPI AEAEASHSHQ GGLGAPMNGS IVRVLVEPGQ
VVEAGTALLV LEAMKMEHSI RAPHAGTVKA LFCLEGDMVS EGTVLVELVE
|
|---|
| |