| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0738 |
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| Symbol | |
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| ID | 4076108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 795827 |
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| End bp | 797764 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006035 |
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| Product | 3-methylcrotonoyl-CoA carboxylase, alpha subunit |
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| Protein accession | YP_612733 |
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| Protein GI | 99080579 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.623779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA AGATCCTGAT TGCCAACCGC GGCGAAATTG CATGCCGGGT GATGGAAACC
GCCCGTCGTC TGGGTGTACG CACCGTCGCC GTCTACTCCG ATGCTGACCG AGACGCCAAA
CATGTGGCCC TTGCGGATGA GGCTGTCCAT GTCGGTCATG GACCTGCCCC GGCGGATAGC
TACCTGCTGC AGGACGAGAT CCTCGCCGCC GCCAAAGCCA CCGGCGCGCA AGGCATACAC
CCTGGCTATG GGTTTCTGTC GGAGAATCCC GATTTTGTGG AAAAGGTCGA GGCAGCCGGT
CTCGCCTTCA TCGGCCCCTC TGCCAGTGCG ATCCGCAAGA TGGGTCTCAA GGACGCCGCC
AAGGCACTGA TGGAAGAGGC GGGCGTTCCG GTGGTTCCCG GCTATCACGG CGACACGCAG
GATGCGGGCT TCCTCGCCAA ACAGGCGGAC AGCATCGGCT ATCCGGTCCT GATCAAGGCG
GTTGCAGGCG GCGGTGGCAA GGGCATGCGG CTGGTCGAGG ACCCCAAGGA TTTCAACGAT
GCGCTCGCCT CGGCGCAGGG CGAAGCCACC ACGTCCTTTG GCAATCCGGC GGTGCTGATT
GAAAAATACA TCCAGAAGCC GCGCCATATC GAGGTACAGG TCTTTGGGGA CGGCACATCG
GCGGTGCATC TGTTTGAACG CGACTGTTCG CTGCAACGTC GCCACCAAAA GGTGATCGAA
GAAGCCCCGG CCCCGGGCAT GACCGACGAG ATGCGCGCCG CCATGGGACA GGCCGCCGTG
CGTGCCGCCG AGGCGATCGG CTATGCGGGC GCGGGCACGG TGGAGTTCAT TGTGGACGGC
TCGGAAGGGC TGCGTGCGGA CGGGTTCTGG TTCATGGAGA TGAACACCCG TTTGCAGGTG
GAACACCCGG TTACCGAGCT CATCACTGGC GTCGATCTGG TGGAGTGGCA GCTGCGCGTC
GCCTCTGGCG AAGGGCTGCC CATGCAACAG GACGACCTTT CCATTACCGG CCACGCCTTT
GAGGCGCGGC TCTATGCCGA GGATGTGCCC AAGGGCTTTT TGCCCGCCAC CGGCACGCTC
TCGCATCTGG CCTTTCCCGA AGGGGTGCGC GCCGACAGCG GTGTGCGGGC AGGGGACACC
ATCAGCCCTT GGTATGATCC GATGATCTCC AAGGTGATCG TGCATGGCCC CTCGCGCGCG
GCAGCGCTGC GTCAGCTGGA TGACGCGCTC GCGCGGACCG AGGTTGCCGG AACCGTAACA
AACCTTGCCT TCCTCGGTGC GCTCACCCGG CATGCAGGCT TTGCTGCGGG CGACGTGGAC
ACGGGCCTGA TCGCGCGCGA TCTCGACAGT CTTGCTGCCG CGCCGGAGAT GAGGGCCGAA
CACAAGATCG CGGCTGCGAT GGTGGCGCTT GATGTGATCG ATCCCAAACC CGAAATGGGC
TTCACGCTTT GGGCGGACCT ACACCGTTCC GTTACGCTTG AAGCGCAGGG CGAGAGTTTC
GAAGCCTCGG TCGAGTTGAG CGGCCCGGAT CGTCAGGACT GGATCCTTGA TGGAGATATG
TTTGCCGTCA ATCGCATGGG GTCGGGCTGG GTTATCAGCG GCATGGCCTT GCCACCCTAT
GCAAAAAGTG GCGACGCCAT CACGATTTTT GACGGCTATG GGCTGAGCTT CAAGGTCGTT
GACCCGCTGG ACCGTGCCGC AGGCGCTGCC GGGGATGGCA ACCTCATTGA GGCCCCGATG
CCGGGCTTGG TCAAGGCGGT CTTTGCCGAG GCGGGCGCCG CAGTCAAAGA AGGCGACCGG
CTCGCCATCC TTGAGGCCAT GAAAATGGAG CACTCTTTGC TAGCCGCCCG TGACGGCGTG
GTTGCAGAAG TTCTTGCGCA AGCGGGCGAT CAGGTGGAGG CTGGTGCAGC GCTGGTGCGG
CTCGAGGAAG AGGCCTGA
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| Protein sequence | MFNKILIANR GEIACRVMET ARRLGVRTVA VYSDADRDAK HVALADEAVH VGHGPAPADS
YLLQDEILAA AKATGAQGIH PGYGFLSENP DFVEKVEAAG LAFIGPSASA IRKMGLKDAA
KALMEEAGVP VVPGYHGDTQ DAGFLAKQAD SIGYPVLIKA VAGGGGKGMR LVEDPKDFND
ALASAQGEAT TSFGNPAVLI EKYIQKPRHI EVQVFGDGTS AVHLFERDCS LQRRHQKVIE
EAPAPGMTDE MRAAMGQAAV RAAEAIGYAG AGTVEFIVDG SEGLRADGFW FMEMNTRLQV
EHPVTELITG VDLVEWQLRV ASGEGLPMQQ DDLSITGHAF EARLYAEDVP KGFLPATGTL
SHLAFPEGVR ADSGVRAGDT ISPWYDPMIS KVIVHGPSRA AALRQLDDAL ARTEVAGTVT
NLAFLGALTR HAGFAAGDVD TGLIARDLDS LAAAPEMRAE HKIAAAMVAL DVIDPKPEMG
FTLWADLHRS VTLEAQGESF EASVELSGPD RQDWILDGDM FAVNRMGSGW VISGMALPPY
AKSGDAITIF DGYGLSFKVV DPLDRAAGAA GDGNLIEAPM PGLVKAVFAE AGAAVKEGDR
LAILEAMKME HSLLAARDGV VAEVLAQAGD QVEAGAALVR LEEEA
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