| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2573 |
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| Symbol | |
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| ID | 4921061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3032237 |
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| End bp | 3034270 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164167 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001094698 |
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| Protein GI | 127513501 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCA AATTATTGAT CGCCAACCGT GGCGAAATCG CCTGCAGAAT CATCAAGACC
GCACAGGTCA TGGGCATCAA GACGGTCGCC CTCTATTCGG ACGCCGACAA GGACGCTCGC
CATGTGGCCA TGGCCGACGA GTCCTTCTAC CTAGGTGGCA GCGCCCCGAG CGAGTCTTAC
CTCAAGGGCG AATTAATCCT TGAAATCGCC AAGCGCAGCG GCGCCCAGGC GATCCACCCT
GGCTACGGCT TCCTGTCTGA AAACGCCGAC TTCGCCCGCC AGTGTGAGCA GGCCGGTATC
GCCTTCGTCG GCCCGAGCGC CGATGCAATC GATGCCATGG GCAGCAAGAG CGCTGCCAAG
ATCATCATGG AACAGGCCAA TGTGCCTCTG GTGCCAGGTT ATCACGGCGA CGACCAGAGC
GACGAGGTGC TGCTCAAGGC CTCTAAAGAG ATAGGCTTCC CTCAGCTGAT CAAGGCCGCC
TACGGCGGCG GTGGTAAGGG GATGCGCATC GTCGAGTCCG AGTCTGAGGC CCTGGAGGCG
ATCAACTCGG CCCGCCGTGA AGCCGCCTCC TCCTTTGGCA ACGACAAGCT GCTGATCGAA
CGCTACTTGA GACAGCCTCG CCACGTCGAG GTGCAGGTGT TTGCCGATAC CCAGGGCAAC
TGCATCTATC TGTCGGATCG CGACTGCTCC ATCCAGCGTC GTCACCAGAA GGTGGTCGAA
GAAGCACCGG CGCCTGGCCT GTCTGACAGC CTGCGCCGCG CCATGGGCGA GGCCGCCGTG
GCCGCCGCCA AGGCGATCGA CTATGTGGGC GCCGGCACGG TAGAGTTTCT GCTGGACACC
CATGCGACCG AGGAGAGCAA TAGCTTCTAC TTCATGGAGA TGAATACCCG CTTGCAGGTA
GAACATCCGG TGACCGAGAT GGTTACGGGC CAAGACCTGG TCAAGTGGCA GCTGATGGTC
GCCAGCGGCA GCGAACTGCC CCTGAGCCAG GAGGATGTAC GCATCCACGG CCACTCCTTC
GAGGTGCGTA TCTACGCCGA AGATCCGCAG AACGAGTTCC TACCCGCCAG CGGCAAGCTC
AACTTCCTAC GTGAGCCTGA GCAGAACCGC TATGTGCGCA TCGATTCCGG CATCCGCGAG
AACGATGTGA TCAGTAACTT CTACGACCCT ATGATCGCCA AGCTGATCGT CTGGGATGAG
TCGCGCCCCC GCGCCCTACA GCGCCTGGTG CACGCCCTGG AGTCCTACCA GATCAGCGGC
CTCAAGCACA ACATAGAGTT TCTGGCCAAC ATCGCCGAGC ACAAAGCCTT CAGCCAGGCG
GATTTCAGCA CAGACTTTAT CGAGCGCTAT GGCGACACCC TGATAGGTGC CAACCTGGAT
GGCGACAACA GCCATGAGCA GAATGGCGCC CTGGCCTTCG CCGCCCTCTA TCACCTGTGC
GCCCAGAAGG AACAGGCCAA GCTTACCGCC ACCAACAGCC AAGATCCTTA CTCGCCATGG
GGACAGGTGA GCGGCTTCAG GCTCAACCGC AGCGGCATGC ATCAGCTGTC TCTGCTGGAC
GACGAGCATG AGGTGCAGCA CCTGACCCTA AGCCAGATTG GCGATTGCTA CTACCTGAAC
CTGAACGATC AACAGCTGAC CCTGAGCGGC GAGCTGAAGC AAGATCTGCT ACACGCCGAG
ATCAACGGCC ACAAGAGCAA GATCCCCGTC AGCCGCGAAG GCGACGACTT CACCCTCTTC
CTGCCAAGCG GCAGCTATCA CTTCCGCGCC CTGCAGACAG AGGTAGTGGA GGAGCAAGCC
AACAGTGAAG ACAAGCTCAA GGCGCCGATG AACGGCACTA TCGTCACTCA CCTGGTCGAG
GTGGGCGATG AGGTCGAGGC GGGTCAAGGC CTGATGGTGA TGGAAGCGAT GAAGATGGAA
TACACCATAG AGGCGCCGTT TGACGGCACA GTCGCTGCCT TCTTCTTCCA GCCAGGCGAA
TTGGTGAGCG ACGGCGCCCT GCTGCTCGAA GTCACTGCGA AAGAGGACGC TTAA
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| Protein sequence | MFTKLLIANR GEIACRIIKT AQVMGIKTVA LYSDADKDAR HVAMADESFY LGGSAPSESY
LKGELILEIA KRSGAQAIHP GYGFLSENAD FARQCEQAGI AFVGPSADAI DAMGSKSAAK
IIMEQANVPL VPGYHGDDQS DEVLLKASKE IGFPQLIKAA YGGGGKGMRI VESESEALEA
INSARREAAS SFGNDKLLIE RYLRQPRHVE VQVFADTQGN CIYLSDRDCS IQRRHQKVVE
EAPAPGLSDS LRRAMGEAAV AAAKAIDYVG AGTVEFLLDT HATEESNSFY FMEMNTRLQV
EHPVTEMVTG QDLVKWQLMV ASGSELPLSQ EDVRIHGHSF EVRIYAEDPQ NEFLPASGKL
NFLREPEQNR YVRIDSGIRE NDVISNFYDP MIAKLIVWDE SRPRALQRLV HALESYQISG
LKHNIEFLAN IAEHKAFSQA DFSTDFIERY GDTLIGANLD GDNSHEQNGA LAFAALYHLC
AQKEQAKLTA TNSQDPYSPW GQVSGFRLNR SGMHQLSLLD DEHEVQHLTL SQIGDCYYLN
LNDQQLTLSG ELKQDLLHAE INGHKSKIPV SREGDDFTLF LPSGSYHFRA LQTEVVEEQA
NSEDKLKAPM NGTIVTHLVE VGDEVEAGQG LMVMEAMKME YTIEAPFDGT VAAFFFQPGE
LVSDGALLLE VTAKEDA
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