| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1774 |
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| Symbol | |
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| ID | 5194923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2026631 |
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| End bp | 2028583 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586244 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001267113 |
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| Protein GI | 148547011 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00809985 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00202818 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGCC CCGCTTTGAC CACCCTGCTG GTCGCCAACC GCGGCGAAAT CGCTTGCCGG
GTGATGCGCA CCGCCAAGGC CATGGGCCTG ACCACTGTCG CCGTGCACAG CGCCACCGAC
CGTGACGCCC GTCACAGCCG CGAAGCCGAC ATCCGCGTCG ACCTGGGCGG CACCAAGGCT
GCCGAAAGCT ACCTGCTGGT CGACAAGCTG CTGGCCGCCG CCAAGGCCAG CGGCGCCCAG
GCCATCCACC CAGGTTATGG CTTTCTGTCC GAGAACGCAG GTTTCGCCCG CGCCATCGAG
CAGGCCGGGC TGATCTTCCT CGGCCCACCG GCCAGCGCCA TCGACGCCAT GGGCAGCAAA
TCGGCAGCCA AGGCGCTGAT GGAGGCCGCC GGCGTGCCGT TGGTTCCGGG CTACCACGGC
GAGGCCCAGG ACCTGGACAC CTTCCGCGCC GCGGCCGAAC GCATCGGCTA CCCGGTGCTG
CTCAAGGCCA GCGCTGGCGG CGGCGGCAAG GGCATGAAAG TGGTCGAGGA AGAAAGCCAG
TTGGCCGACG CCCTGGCGTC GGCCCAGCGT GAGGCACAGT CGTCGTTCGG CGATGCGCGC
ATGCTGGTGG AAAAGTACGT GCTCAAGCCA CGCCATGTCG AAATCCAGGT GTTTGCCGAC
CAGCACGGCA ACTGCCTGTA CCTTAACGAA CGCGACTGTT CCATCCAGCG TCGCCATCAG
AAGGTGGTGG AAGAGGCCCC TGCCCCCGGC CTGTCGCCCG AACTGCGCCG GGCCATGGGC
GAAGCGGCGG TGCGTGCCGC CCAGGCTATC GGTTACGTGG GTGCTGGCAC CGTGGAGTTT
CTGCTTGATG CACGTGGCGA ATTCTTCTTC ATGGAGATGA ACACCCGCCT GCAGGTGGAA
CACCCGGTCA CCGAGGCCAT CACCGGCCTG GACCTTGTTG CCTGGCAAAT TCGCGTGGCC
TGTGGCGAAG CCCTGCCGAT CACACAGGAA CAGGTGCCGC TGATCGGCCA TGCCATCGAA
GTGCGCCTGT ATGCCGAAGA CCCGGCCAAC GATTTCTTAC CCGCGACCGG CAAATTGGCG
CTGTACCGTG AATCGGCACC TGGCGAAGGC CGGCGGGTGG ACAGCGGGGT CAGCGAAGGC
GATGTGGTGT CGCCGTTCTA CGACCCGATG CTGGGCAAGC TGATTGCTTG GGGTGAAAAC
CGCGAACAGG CACGCCTGCG CTTGCTGGCC ATGCTCGACG AGTTTGCCAT TGGCGGATTG
AAGACCAACA TCGCCTTCCT GCGCCGCATT CTCGCGCACC CTGCGTTCGC GGCGGCAGAG
CTGGACACCG GCTTCATTCC CCGCCACCAG GATGTGCTGC TGCCGGCGCC ACGTGCGCTG
CCGGCTGGCT TTTGGGAGGC GGCAGCCGAA GCCTGGCTGC AGGGCCAGGC GGGGCATCAG
CGCGAAGACG ATCGCCATTC GCCGTGGAGC GGGCGTAATG GACTGCGCTT GGGCCTGCCT
GCACGCAGCA GCTTGCATCT GGTGAGTGCT GGGCACGATC AGGCAGTGGC CCTGGAGCGC
AGCGCTGCTT CTACCTGGCA GCTGCAAGGT GAGCAGTTGG TGCATGACCA GAACGGCGTG
CGTCGCCAGC ATCTGGCAAT CCGTCGGGGT GGCACGCTGT ACCTGCACTG GGATGGCGAA
ATGCATGCCA TCGAAGCCTT CGACCCGATT GCCGAGGCCG AAGCCAGCCA CAGCCATCAG
GGTGGGCTGG GTGCGCCCAT GAACGGCAGT ATCGTGCGGG TGCTGGTCGA ACCTGGGCAG
GTGGTGGAAG CCGGTACTGC GCTGGTGGTA CTGGAGGCCA TGAAGATGGA GCACAGCATT
CGTGCGCCGC ATGCCGGCAC AGTGAAGGCG CTGTTCTGCC TGGAGGGGGA CATGGTCAGC
GAAGGGACTG TGCTGGTCGA ACTGGTGGAA TAA
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| Protein sequence | MSRPALTTLL VANRGEIACR VMRTAKAMGL TTVAVHSATD RDARHSREAD IRVDLGGTKA
AESYLLVDKL LAAAKASGAQ AIHPGYGFLS ENAGFARAIE QAGLIFLGPP ASAIDAMGSK
SAAKALMEAA GVPLVPGYHG EAQDLDTFRA AAERIGYPVL LKASAGGGGK GMKVVEEESQ
LADALASAQR EAQSSFGDAR MLVEKYVLKP RHVEIQVFAD QHGNCLYLNE RDCSIQRRHQ
KVVEEAPAPG LSPELRRAMG EAAVRAAQAI GYVGAGTVEF LLDARGEFFF MEMNTRLQVE
HPVTEAITGL DLVAWQIRVA CGEALPITQE QVPLIGHAIE VRLYAEDPAN DFLPATGKLA
LYRESAPGEG RRVDSGVSEG DVVSPFYDPM LGKLIAWGEN REQARLRLLA MLDEFAIGGL
KTNIAFLRRI LAHPAFAAAE LDTGFIPRHQ DVLLPAPRAL PAGFWEAAAE AWLQGQAGHQ
REDDRHSPWS GRNGLRLGLP ARSSLHLVSA GHDQAVALER SAASTWQLQG EQLVHDQNGV
RRQHLAIRRG GTLYLHWDGE MHAIEAFDPI AEAEASHSHQ GGLGAPMNGS IVRVLVEPGQ
VVEAGTALVV LEAMKMEHSI RAPHAGTVKA LFCLEGDMVS EGTVLVELVE
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