21 homologs were found in PanDaTox collection
for query gene Bxe_A3627 on replicon NC_007951
Organism: Burkholderia xenovorans LB400



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A3627  ABC amino acid transporter, periplasmic ligand binding protein  100 
 
 
178 aa  369  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5590  extracellular solute-binding protein family 3  37.08 
 
 
277 aa  65.1  0.0000000006  Variovorax paradoxus S110  Bacteria  normal  0.332068  n/a   
 
 
-
 
NC_009485  BBta_1255  hypothetical protein  39.19 
 
 
273 aa  61.2  0.000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0214745 
 
 
-
 
NC_010511  M446_3631  extracellular solute-binding protein  37.7 
 
 
282 aa  60.8  0.00000001  Methylobacterium sp. 4-46  Bacteria  normal  0.867063  normal  0.017598 
 
 
-
 
NC_011894  Mnod_3969  extracellular solute-binding protein family 3  40.98 
 
 
280 aa  59.7  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0792  extracellular solute-binding protein  44.26 
 
 
294 aa  58.9  0.00000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.256903  normal 
 
 
-
 
NC_012917  PC1_2694  extracellular solute-binding protein family 3  39.02 
 
 
277 aa  56.2  0.0000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2512  putative cyclohexadienyl dehydratase precursor signal peptide protein  31.08 
 
 
267 aa  50.4  0.00001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.204589  normal  0.0335477 
 
 
-
 
NC_009668  Oant_4078  extracellular solute-binding protein  30.43 
 
 
277 aa  49.7  0.00002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4123  cyclohexadienyl dehydratase  29.73 
 
 
263 aa  48.1  0.00006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0829887  normal  0.672072 
 
 
-
 
NC_012791  Vapar_5243  extracellular solute-binding protein family 3  34.43 
 
 
283 aa  48.1  0.00006  Variovorax paradoxus S110  Bacteria  normal  0.517304  n/a   
 
 
-
 
NC_013456  VEA_002034  cyclohexadienyl dehydratase  29.87 
 
 
258 aa  46.2  0.0002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3744  chorismate mutase, putative  42.86 
 
 
421 aa  45.4  0.0004  Shewanella baltica OS155  Bacteria  normal  0.117732  n/a   
 
 
-
 
NC_010322  PputGB1_3166  extracellular solute-binding protein  34.09 
 
 
279 aa  43.5  0.001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00417  prephrenate dehydratase  28.57 
 
 
258 aa  43.5  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_2779  Arogenate dehydratase  24.27 
 
 
270 aa  43.5  0.002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2375  Arogenate dehydratase  24.3 
 
 
271 aa  42.4  0.004  Ralstonia pickettii 12D  Bacteria  normal  0.380609  normal 
 
 
-
 
NC_007643  Rru_A0779  extracellular solute-binding protein  31.33 
 
 
350 aa  41.2  0.008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4237  extracellular solute-binding protein  36.36 
 
 
284 aa  40.8  0.01  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4191  polar amino acid ABC transporter periplasmic amino acid-binding protein  36.36 
 
 
284 aa  40.8  0.01  Yersinia pestis Angola  Bacteria  normal  normal  0.0122303 
 
 
-
 
NC_009708  YpsIP31758_4165  polar amino acid ABC transporter periplasmic amino acid-binding protein  36.36 
 
 
284 aa  40.8  0.01  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>