Gene BBta_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1255 
Symbol 
ID5152068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1335961 
End bp1336782 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content62% 
IMG OID640556242 
Producthypothetical protein 
Protein accessionYP_001237401 
Protein GI148252816 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0214745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACTTG GCGCAGCCGC GGCCGCACTC GCAGCTGGCT CGGTCGCATC GCCGGCCCTC 
GCGCAGTCGC AACCGGAGAG CACGTTCGCG CAAATTCGCC GGACCAAGAA GCTTCGGATT
GCCGGTATCG TCGGTACCGA GCCCTACTAC CACAAGGACA TCGCGACCGG GCAATGGTCG
GGCTTCTGCG TGAGCATGGC GACCGAACTC GCCAAGGCGA TGGAGGCCGA GGTCGAGATC
ATCGAGTCGA CCTGGGGCAA CTCGGTGCTG GATCTCCAGG CCAATAAGAT CGACATCATG
TTCGGACTGA GCCCGACGCC GTCACGGGCC CTGATCGTGG AATTCACCCG CCCGATCATG
AACAACACGT TTACCATCAT CGCGAAGTCC GGCTTCGAGC CGAAATCGTG GGATGACCTC
AACAAGCCGG AGGTGAAAGT GGCCGTGGAC ATCGGCTCTA CGCACGATCT CTACGCGCGG
CGAACCCTTC CGAAGGCGAC GCTGGTTGCT CTCAAGTCGC CGGATGAGGC TGTGCTGGCG
GTGCAATCCG GCCGCGCCGA CTGCCTGATC CAGGTCGCGA TGCTGTCGCT GGTGACCGTC
AAGAAGAACG CGAAGGTCGG CAAGGTCATC ATCCCGACGC CGGTGGCCGC GCAGCCGACC
TGCTGCGGAG TGCGTGTCGA TTCCGATACC CGTTTCCGCA CCTATGTCGA CAACTGGCTG
GAATATAGCC GTGCCCTCGG CGCGTTGCGC GAATGGATCC TGGGGAGTCT TTCGTTGGTG
AACATCCAGG AGCAGGATAT TCCTCCTGGT CTCCAGTTCT GA
 
Protein sequence
MGLGAAAAAL AAGSVASPAL AQSQPESTFA QIRRTKKLRI AGIVGTEPYY HKDIATGQWS 
GFCVSMATEL AKAMEAEVEI IESTWGNSVL DLQANKIDIM FGLSPTPSRA LIVEFTRPIM
NNTFTIIAKS GFEPKSWDDL NKPEVKVAVD IGSTHDLYAR RTLPKATLVA LKSPDEAVLA
VQSGRADCLI QVAMLSLVTV KKNAKVGKVI IPTPVAAQPT CCGVRVDSDT RFRTYVDNWL
EYSRALGALR EWILGSLSLV NIQEQDIPPG LQF