| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4123 |
|---|
| Symbol | |
|---|
| ID | 5154556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 4331465 |
|---|
| End bp | 4332256 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640558954 |
|---|
| Product | cyclohexadienyl dehydratase |
|---|
| Protein accession | YP_001240092 |
|---|
| Protein GI | 148255507 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0829887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.672072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTT TCGACCGGAC GATCGCGACC CTGACCGGGA TTGCGCTGTT GTGGGGAGTC
GCCAGCGCAG CGCTGGCCGA GCAGGCCTCG CGCCTCGACG AGATCATGCA GCGGGGAAGC
CTTCGAGTCG GCATGACCGG CGACTACAAG CCTTTTACCT ATCTCGACAA GGCCACCGGC
AAGTTCTCCG GCTTCGACGT CGACATGGCC GAGGCGCTCG GCAAGGCACT CGGCGTGAAG
GTGGAGTTCG TGCCGACCAG CTGGCCGCAG TTGATGAAGG ATTTCGAGGC CGACAAGTTC
GACGTCGCGA TGGGCGGGGT GTCGATCACC CTCGACCGCC AGAAGAAGGG CTTGTTTTCG
ACGCCGATCA TGCGCGAGGG CAAGACTCCG ATCGCCCGCT GCAGCGATAC CTCGAAATAC
CAGACGCTGT CCGACATCGA CAAGCCGGGC ACCCGTGTCA TCGTCAATCC CGGCGGCACC
AATGAGCGCT TTGCCCGCGC CAACGTCAAG GCGGCGGACA TCCGCGTCCA TAATGACAAC
GTCACCATTT TCGAGGAGAT CGCCAAGGGC GATGCCGACC TGATGATGAC CGACGCCTCC
GAGACGCGCT ACCAGCAGAA GCTGCATCCC GGCGTGCTCT GCGCCGTCCA CCCCGACAAG
CCGTTCGACT TTTCCGAGAA GGCCTACTGG CTGCAGCGCG ACGTCGCCCT CAAGGCGTTC
GTCGATCAGT GGCTGCATAT CTCGACGGAG AACGGCAGCT ATCAGGCGAT CTACAAGATC
TGGTTCGAGT GA
|
|---|
| Protein sequence | MGFFDRTIAT LTGIALLWGV ASAALAEQAS RLDEIMQRGS LRVGMTGDYK PFTYLDKATG
KFSGFDVDMA EALGKALGVK VEFVPTSWPQ LMKDFEADKF DVAMGGVSIT LDRQKKGLFS
TPIMREGKTP IARCSDTSKY QTLSDIDKPG TRVIVNPGGT NERFARANVK AADIRVHNDN
VTIFEEIAKG DADLMMTDAS ETRYQQKLHP GVLCAVHPDK PFDFSEKAYW LQRDVALKAF
VDQWLHISTE NGSYQAIYKI WFE
|
|---|
| |