Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00417 |
Symbol | |
ID | 5554248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 401398 |
End bp | 402174 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640905912 |
Product | prephrenate dehydratase |
Protein accession | YP_001443659 |
Protein GI | 156972752 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CGTTGCTTGC GCTAGGAATG TGTTTACTTG CGATGACCCA AGTCGCTCAT GCTAACAGCC GTTTACAAGA GGTGTTGGAT AAGGGCGTTT TGCGTGTCGG AACGACAGGG GATTGGAATC CGATGACAAT GAAAGATCCC GCTACTAATA GTTATCGTGG TTTTGATATC GATGTCACCA CCGAGCTTGC CAAAGATCTT GGCGTTAAGG TGGAATATGT TGCGACCGAT TGGAAAACGC TAGTCAATGG CATTACTGCC AACAAATACG ATATTACCGG TAGTGCGTCA TTGAACATGT CACGTGCAAA AGTAGCAGGT TATAGCCAAC CGTATTTCTA CCTTGCGTTT GTGCCTGTGG TGCAAAAGAA AGACTTAGCG AAATTCTCAG ATTGGGCAGA CTTTGACAAG CCTGATGTAA AAGTGGCGGC TACGCTTGGC ACTGTGCAAG AAAAGATGGT CAAAGACTTC TTCCCATCTG CACAGCACAT TGTGATTGAA GCGCCGGCGC GTGATTTCCA AGAGCTTCTG GCTCGTCGTG CCGATGTCTC CGTGACGTCC AACGTTGAAG CGGCAACGCT GGTGGAGAAA TTTAAACAGT TAGCGATTGT CCCAGTTAAA GAGCCTCGCA AGCCAACGCC TATTGCGATG CTGCTGCCTC AAGACGACCA AGTCTGGATT AACTATATTA ACCACTGGGT TGAGTTGAAG AAAACTCAAG GCTTCTTTAA GCAAACCGCC GAGAAATGGG GCTTAAAGAG TATGTAA
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Protein sequence | MKKTLLALGM CLLAMTQVAH ANSRLQEVLD KGVLRVGTTG DWNPMTMKDP ATNSYRGFDI DVTTELAKDL GVKVEYVATD WKTLVNGITA NKYDITGSAS LNMSRAKVAG YSQPYFYLAF VPVVQKKDLA KFSDWADFDK PDVKVAATLG TVQEKMVKDF FPSAQHIVIE APARDFQELL ARRADVSVTS NVEAATLVEK FKQLAIVPVK EPRKPTPIAM LLPQDDQVWI NYINHWVELK KTQGFFKQTA EKWGLKSM
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