Gene VIBHAR_00417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00417 
Symbol 
ID5554248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp401398 
End bp402174 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content47% 
IMG OID640905912 
Productprephrenate dehydratase 
Protein accessionYP_001443659 
Protein GI156972752 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CGTTGCTTGC GCTAGGAATG TGTTTACTTG CGATGACCCA AGTCGCTCAT 
GCTAACAGCC GTTTACAAGA GGTGTTGGAT AAGGGCGTTT TGCGTGTCGG AACGACAGGG
GATTGGAATC CGATGACAAT GAAAGATCCC GCTACTAATA GTTATCGTGG TTTTGATATC
GATGTCACCA CCGAGCTTGC CAAAGATCTT GGCGTTAAGG TGGAATATGT TGCGACCGAT
TGGAAAACGC TAGTCAATGG CATTACTGCC AACAAATACG ATATTACCGG TAGTGCGTCA
TTGAACATGT CACGTGCAAA AGTAGCAGGT TATAGCCAAC CGTATTTCTA CCTTGCGTTT
GTGCCTGTGG TGCAAAAGAA AGACTTAGCG AAATTCTCAG ATTGGGCAGA CTTTGACAAG
CCTGATGTAA AAGTGGCGGC TACGCTTGGC ACTGTGCAAG AAAAGATGGT CAAAGACTTC
TTCCCATCTG CACAGCACAT TGTGATTGAA GCGCCGGCGC GTGATTTCCA AGAGCTTCTG
GCTCGTCGTG CCGATGTCTC CGTGACGTCC AACGTTGAAG CGGCAACGCT GGTGGAGAAA
TTTAAACAGT TAGCGATTGT CCCAGTTAAA GAGCCTCGCA AGCCAACGCC TATTGCGATG
CTGCTGCCTC AAGACGACCA AGTCTGGATT AACTATATTA ACCACTGGGT TGAGTTGAAG
AAAACTCAAG GCTTCTTTAA GCAAACCGCC GAGAAATGGG GCTTAAAGAG TATGTAA
 
Protein sequence
MKKTLLALGM CLLAMTQVAH ANSRLQEVLD KGVLRVGTTG DWNPMTMKDP ATNSYRGFDI 
DVTTELAKDL GVKVEYVATD WKTLVNGITA NKYDITGSAS LNMSRAKVAG YSQPYFYLAF
VPVVQKKDLA KFSDWADFDK PDVKVAATLG TVQEKMVKDF FPSAQHIVIE APARDFQELL
ARRADVSVTS NVEAATLVEK FKQLAIVPVK EPRKPTPIAM LLPQDDQVWI NYINHWVELK
KTQGFFKQTA EKWGLKSM